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CAZyme Information: MGYG000003671_00267

You are here: Home > Sequence: MGYG000003671_00267

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species HGM10818 sp900772445
Lineage Bacteria; Firmicutes; Bacilli; RF39; UBA660; HGM10818; HGM10818 sp900772445
CAZyme ID MGYG000003671_00267
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2395 275938.62 5.0393
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003671 1177326 MAG Peru South America
Gene Location Start: 7407;  End: 14594  Strand: +

Full Sequence      Download help

MKFYEVRQIY  SQTIENVGQN  EDNWIKFLKC  ASHNFKYSFD  NQILIYAQKP  NSIACAEMQE60
WNNKVKPKRW  VNKGTAGIAI  FAKEDSPLPL  RFVFDLTDTH  NYMGTQYHLW  KAEKKYQTEI120
IEALENKFGG  DLANSSFEQA  IFSSTFNMVE  DNITDYITEI  IESKKGSRLE  KLSDSEIEAL180
TKTFVWASVA  YMTLNRCGIN  ANDEIDKKEF  SILKYFNSTK  LITTIGTAIS  DIAENGLREI240
ALTIRNLKLE  EIRQNRTFVK  SDIKDYDNNI  NNEKGGIEDG  KTRIQTSRGL  SNTKYNNEKE300
NITDREIRNN  EIELSERTQK  GRIYNAQSEQ  YSGRTLGGNS  EQSNRNDRTN  NEEIAGEREY360
NRGIESTRPD  EVGGLNEQLQ  DDSRGTSGKG  ADLQLKTRTD  YIKNPEIPEI  QDKDLIKEII420
RNAPNISNKI  TEINKFINEN  EKDVEKCKQY  VNKVFGEAYT  EFIIKNDVKV  GYKTFNSGVD480
FWKGNYLTRN  ADSLISWDTV  TDNLITMVKT  GEIFLDKTGL  LDEQEQIGNI  IQAEVTNTSV540
FSFTQEMIDS  VLREGNQIQN  GKFEIYKNLS  ENLDSTENAN  YLKNVYGIGG  RSADEFGNSM600
DYNSKGILLS  RGYEDNSPKY  LIKWLQAEKR  IRQLISDDRY  LNSKEKEEYK  KWLEKNESVI660
ENIEETKENA  AEENYIYKIG  DNVFLGNEEY  EITNVTDKQV  TLADAKFPLF  TKQLSYEEFD720
KKAKENPFND  HLKESNRADA  VTDIPETEEN  STIEVAEIKE  KITDEKPNIT  IKDTKIEIPK780
IKTKRKNKIE  YFDLHPEIPI  SERNNYEIID  NNLGEGSKKE  KYKRNIEAIK  ILKKCDEENR840
YATPEEQEKL  AQYVGWGGIP  EAFDSRKDEW  LSEYNELKEL  LTEKEYKEAK  NSTLTAFYTP900
PVVIKSIYKA  LKKMGLERGN  ILEPSCGVGN  FFGLLPKELA  ECKIYGVEID  SISGGIARQL960
YQKNTIAIKG  FEEVELPDAF  FDVAVGNVPF  GDYKLADKRY  DKNKFPVHDY  FFAKTLDKVR1020
PNGIIAFITS  KGTLDKIGSK  ARKYISQRAE  FIGAIRLPNN  TFKKNANTVV  TSDIIFLKKR1080
DKLVDLEDDW  VELSTNENGI  KMNKYFVDNP  DMILGKMETC  TTQFGIDTTC  NPNYDISLEE1140
QLDNAIENIT  AQIEDYQIDN  LDEQEEISIP  ASSNVRNFSY  TIVENQVYFR  ENSRMYLQNL1200
PVTSISRIKG  MIEIRDTLRT  LIELQTDDGS  DEEIQIEQAK  LSRLYDSFTK  KYGIINSKSN1260
ERAFSQDDSY  FLLCSLEVLD  KDREFVRKAD  MFYKRTIKPN  KQVSKADSAV  DALILSVTEK1320
ACVDLEYMSK  LTGKEKEQLI  KELEGSIYKD  PMTKEYVTAD  EYLSGNVRQK  LRIAQEFAQN1380
NKEYEINVKA  LERVKIKDLS  ASEISVRLGA  TWIPASDIEE  FIFDLLKPSY  YVQSKVKVHY1440
SDYTSEWNIA  NKSEDRYNVK  SYNTYGTSRI  NAYKIIEQTL  NLKDVRIFDT  VIDIDGNEKK1500
VLNKKETAIA  QSKQEIIKNK  FVEWIWKDQE  RRERLVTLYN  EKFNNIKPRE  FDGQYIKFGG1560
INPEIILRKH  QVNAIARILY  GKNVLLAHEV  GAGKTFEMVA  GAMESKRIGL  CNKSLFVVPN1620
HIIEQFASDF  LQLYPSANLL  VTTKKDFAMN  NRKKFISKIA  TGEYDAIIIG  HSQFEKIPIS1680
KERQEKILER  QINEMALGIE  DLRNNDGEYY  SIKQLEKSKK  KIEERLKKLN  DQANKDSLIT1740
FEQLGVDRLF  VDEAHYFKNL  FLYTKMRNVS  GIAQTEAQKS  SDLFMKCQYI  DELTDGKGIV1800
FATGTPISNS  MVELYTMQRY  LQYQTLKESG  LLQFDSWAST  FGETANSIEL  NPEGTGYRSK1860
TRFAKFYNLP  ELMALFKEVA  DVQTADTLNL  PTPEAVYKTI  VAKPSDIQVE  MVQNLAERAE1920
RIRKGEVNAQ  DDNMLIITNE  GRKLALDQRL  INEMLPDFEN  SKVNLCVNNL  YEIYDKTKQN1980
KSTQLVFCDL  STPKGDGKFN  VYDDIKQKLI  SKGVNEDEIA  FIHDATNENK  KKELFAKVRS2040
GDVRILIGST  SKMGAGTNVQ  QKLVAIHHLD  CPWRPADLTQ  RNGRGIRQGN  ENSKIEIFTY2100
VTERTFDAYL  YQLIQNKLKF  ITQIMTSKAI  SRSEEDIDEK  VLSVAEVKAL  AAGNPLIIEK2160
TQLEADVAKL  KLLKQSYLSQ  VYNLEDLIAK  FYPKKIKELQ  GEIETYKKDI  VIRNNNTQSD2220
NEEKFSPMII  AGKIYTNKEN  AGTELIEQCK  NKKNMETEEI  GEYRGFKMYL  RIDLVSREFS2280
LELKGNATHT  VNLGTDKFGN  ITRIDNVLAD  LEKRVERKAV  ELKETERQLE  TAKNDIEIPF2340
NQESELQEKT  KKLDNINIML  NLDEKDNELM  DDDEVQEEKT  PEENKSQDYD  RKDFR2395

Enzyme Prediction      help

No EC number prediction in MGYG000003671_00267.

CDD Domains      download full data without filtering help

Created with Snap1192393594795987188389581077119713171437155616761796191620352155227511021621COG464620032089HELICc15671668DEXDc15671625DEXDc_RapA8841079HsdM
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 1.47e-79 1102 1621 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
smart00490 HELICc 1.63e-08 2003 2089 1 82
helicase superfamily c-terminal domain.
smart00487 DEXDc 1.94e-07 1567 1668 9 110
DEAD-like helicases superfamily.
cd18011 DEXDc_RapA 9.13e-07 1567 1625 1 61
DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
COG0286 HsdM 1.14e-06 884 1079 155 375
Type I restriction-modification system, DNA methylase subunit [Defense mechanisms].

CAZyme Hits      help

Created with Snap119239359479598718838958107711971317143715561676179619162035215522758062311ASV45029.1|GH238062311QIW86704.1|GH238062311QIW86628.1|GH238132317AEY69616.1|GH238132352AXF51455.1|GH23
Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 1.27e-317 806 2311 1548 3142
QIW86704.1 5.02e-317 806 2311 1616 3210
QIW86628.1 5.02e-317 806 2311 1616 3210
AEY69616.1 7.10e-299 813 2317 1696 3292
AXF51455.1 9.41e-295 813 2352 1789 3419

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap119239359479598718838958107711971317143715561676179619162035215522758432141sp|Q71TF8|DARB_BPP1848990sp|Q60354|Y046_METJA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 1.87e-32 843 2141 68 1569
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1
Q60354 4.10e-07 848 990 14 165
Putative methyltransferase MJ0046 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0046 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000067 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003671_00267.