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CAZyme Information: MGYG000004520_00001

You are here: Home > Sequence: MGYG000004520_00001

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_E bromii_A
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Ruminococcus_E; Ruminococcus_E bromii_A
CAZyme ID MGYG000004520_00001
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1962 MGYG000004520_1|CGC1 224708.33 4.9847
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004520 2155170 MAG Israel Asia
Gene Location Start: 5;  End: 5893  Strand: +

Full Sequence      Download help

MDRYLNPKEK  EHYPQWIESQ  EERRAKIKET  KRNREILSNA  PPEQEVEPTE  KEPEEAEIPQ60
DVEYEYHLGD  KVYIGASEYE  ILSVDDERVM  LYDYDMPLFN  KEFSRTEFDR  KVRENPMNEH120
LIVKEVPIEE  RNVTANYNDA  FFINRDNKTV  TWIYYNPDSE  TGGHYVTNVL  NFDEITEISK180
DSQTPDEFFD  RLESIANQTL  ADVGTEWFSE  SESRFLGNPD  FTDCTLNTMQ  SIISEAGKFS240
VTEVQTNKGN  MSIKEPEPVV  PAWEQKRKVK  VFDLHPDVPM  ADRHTFNLRE  NEVETVGKKE300
RFRRNIMAIQ  HLKKCQEENR  FATPEEQIVL  SKYVGWGGLS  EAFDENNSAW  ATEYLELSSV360
LTPEEYASAR  ESTLTAFYTP  PEVITAIYKA  LEQMGFKEGN  LLEPSCGIGN  FIGMLPDTMQ420
DSKIYGVELD  TISAGIAQQL  YQKTTIAAQG  FEETNLPDSF  FDGVVGNVPF  GDFKVSDKRY480
DKHKFLIHDY  FFAKSLDKLR  PGGVMALVTS  KGTMDKENSA  VRKYIAQRAE  LLGAIRLPNN540
TFKGNAGTEV  VSDILILQKR  DRLIDIEPDW  VHLDTDENGI  KMNSYFVQYP  EMILGDMKMV600
SGRFGMEATC  VPYENADLAA  QLDEALANIH  GEITEYEAEE  ELEEEDNSIP  ADPTVKNFSY660
TVVDDKIYYR  ENSRMTPVEV  SATAENRIKS  MIAIRNSVRT  LIELQTEDYP  DSEIKAEQER720
LNRLYDTFSG  KYGLINSRAN  TSAFSQDSSF  SLLSALEIIG  EDGELERKAD  MFSKRTIKPH780
TPVTSVDTAS  EALAVSLGEK  ATIDMDYMME  LSGKSENEIF  EDLKGVIFLN  PLYEYGNSYE840
PKYLMADEYL  SGNVREKLRI  AKNSAELYPE  DYKVNVEALQ  KVQPKDLTAS  EISVRLGTTW900
LPPDDVQEFI  FHLLQPPNYL  QFDIKVRFSP  YTSEWYIEGK  VCDKLNVKAY  NTYGTSRINA960
YKIIEETLNL  KDVRVFDYIE  DVEGKKKAVL  NKKETAIAQS  KQEIIKQEFQ  DWIWSDPERR1020
ERLCKYYNEK  FNSIRPREYD  GSHIIFNGMN  PEIELREHQK  NAVAHILYGG  NTLLAHAVGA1080
GKTFEMVAAA  MESKRLGLCN  KSLFVVPNHL  TEQWAAEFLQ  LYPAANILVA  TKKDFETKNR1140
KKFCGRIATG  DYDAVIIGHS  QFEKIPISIE  RQRAILEQQL  DELTDGIADL  KRNRGENFSI1200
KQLEKSRKSV  KQKLEKLNDQ  SRKDDVVTFE  ELGVDRLFVD  ESHYYKNLYL  YTKMRNVGGI1260
AQTEAQKSSD  LFMKCRYLDE  ITGGRGTVFA  TGTPISNSMV  ELYTIQRYLQ  YNTLVKNNLQ1320
HFDSWASIFG  ETVTAVELTP  EGTGYRAKTR  FAKFYNLPEL  MAMFKEVADI  KTADMLNLPV1380
PEAHFHNIAV  KPSEMQKEMV  ASLAERAEEV  RGGGVDSSID  NMLKITNDGR  KLALDQRMLN1440
DMLPDFKGSK  INACVDNIYR  IWRETADKKS  AQLVFCDLST  PKKDGTFSVY  NDIRKKLIER1500
GIPESEIKFI  HEADTDMKKK  ELFQKTRKGE  VRVLLGSTQK  MGAGTNVQDK  LIALHDLDCP1560
WRPSDLEQRS  GRIVRQGNEN  PQVDIYRYVT  EQTFDAYLYQ  LVEGKQKFAS  QIMTSKSPVR1620
SAEDIDEAAL  SYAEIKMLAT  GNPYIKEKMD  LDIQVQKLKL  LKSNFLSEKY  ALEDKVIKFY1680
PQQIAYLKSR  VEGLTKDFKT  AKQHPKPIDE  QPLGMTVLSV  SYSEKAEAGQ  AIINACKLMR1740
SPEPIVLGKY  RGFNMNLLFD  TINRNYVLRL  KGIVSRDVEL  GSDASGNILR  IDNSIERLEK1800
ELISTKNNLE  NTQKQFETAK  QEIKKPFARE  KKLKTMLARL  KELNILLNMD  SKEVNDVSNQ1860
HDCKEDKKKT  DPIEIMRHRD  TDGDGVCDYI  DSNGYTKPND  QYQYREISAN  EYAKLKDAGF1920
DLSQKCKSSL  TKTDCFILKC  NTAEISQIDE  ILKPALNKAI  KY1962

Enzyme Prediction      help

No EC number prediction in MGYG000004520_00001.

CDD Domains      download full data without filtering help

Created with Snap981962943924905886867848829811079117712751373147115691667176518635821109COG464612501439COG464610531156DEXDc10551303DEXDc_RapA399569YtxK
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 1.21e-70 582 1109 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 9.70e-28 1250 1439 439 635
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
smart00487 DEXDc 7.33e-11 1053 1156 7 110
DEAD-like helicases superfamily.
cd18011 DEXDc_RapA 2.12e-10 1055 1303 1 173
DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
COG0827 YtxK 1.73e-09 399 569 173 348
Adenine-specific DNA methylase [Replication, recombination and repair].

CAZyme Hits      help

Created with Snap981962943924905886867848829811079117712751373147115691667176518632861798ASV45029.1|GH232861798QIW86704.1|GH232861798QIW86628.1|GH232951843AXF51455.1|GH232951799AEY69616.1|GH23
Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 286 1798 1548 3142
QIW86704.1 0.0 286 1798 1616 3210
QIW86628.1 0.0 286 1798 1616 3210
AXF51455.1 1.63e-314 295 1843 1788 3423
AEY69616.1 2.87e-313 295 1799 1695 3287

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap981962943924905886867848829811079117712751373147115691667176518633231626sp|Q71TF8|DARB_BPP1377560sp|P52284|MTR1_PBCVX
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 2.13e-33 323 1626 68 1567
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1
P52284 9.19e-06 377 560 26 207
Type II methyltransferase M.CvrRI OS=Paramecium bursaria Chlorella virus XZ-6E OX=36360 GN=CVIRIM PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000038 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004520_00001.