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CAZyme Information: MGYG000000242_00210

You are here: Home > Sequence: MGYG000000242_00210

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterocloster sp000431375
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster; Enterocloster sp000431375
CAZyme ID MGYG000000242_00210
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
440 MGYG000000242_1|CGC2 48865.31 4.9271
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000242 3795523 Isolate China Asia
Gene Location Start: 195330;  End: 196652  Strand: -

Full Sequence      Download help

MGYRVMELGA  AGDGKTNDAH  VIQKAIDLCS  EQGGGVVIME  GGHTYLSGSI  VLKSHVELVV60
ETGAVLKASE  DLNDYQYISE  LAKRGHDHMV  EVPTFVNCEY  DGKPRQYFIY  SRDTDGVRIS120
GGGVIDGSEE  IYYGEVREDQ  IDGAFYPRIP  LILMEHCTHL  TIQNVTIRKS  GFWTTHLVGC180
EEVEISGVRI  LNNRMMANCD  GIDPDHCKHV  RISNCHIEAA  DDCIVLKTTE  ANHHYGPCED240
IVISGCTLAS  TSAAIKIGTE  SVDDFKDIII  DNCSIYDTNR  GISFQLRDQG  NIENVLINNC300
VIRTKNVSEC  WWGFAEPINI  ASINRKDEIP  SGKIKGLSIT  NVRCKGEGSI  YIAGKDSAPI360
EDLTLNNIRL  ELEKTTKYPI  KGYDFRPCCG  PDFQEGKING  IYVKNAKNVK  AENLEVTVHD420
NMKEWVDKEI  CFENAVVKEK  440

Enzyme Prediction      help

No EC number prediction in MGYG000000242_00210.

CAZyme Signature Domains help

Created with Snap2244668811013215417619822024226428630833035237439641827389GH28
Family Start End Evalue family coverage
GH28 27 389 2e-63 0.9353846153846154

CDD Domains      download full data without filtering help

Created with Snap224466881101321541761982202422642863083303523743964182335Pgu15371PLN027935307PLN022185281PLN0300394369Glyco_hydro_28
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.02e-53 2 335 82 421
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02793 PLN02793 6.88e-12 5 371 55 395
Probable polygalacturonase
PLN02218 PLN02218 9.83e-11 5 307 70 345
polygalacturonase ADPG
PLN03003 PLN03003 1.18e-10 5 281 26 265
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 2.40e-10 94 369 35 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Created with Snap224466881101321541761982202422642863083303523743964181426QEH68079.1|GH283430BCJ96758.1|GH281416ANU45921.1|GH281416QQQ99325.1|GH281416QIX90756.1|GH28
Hit ID E-Value Query Start Query End Hit Start Hit End
QEH68079.1 1.10e-146 1 426 1 426
BCJ96758.1 2.64e-137 3 430 3 428
ANU45921.1 3.11e-104 1 416 1 410
QQQ99325.1 3.11e-104 1 416 1 410
QIX90756.1 4.95e-103 1 416 1 410

PDB Hits      download full data without filtering help

Created with Snap2244668811013215417619822024226428630833035237439641832605OLP_A52283JUR_A32384MXN_A51282UVE_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 1.26e-19 3 260 45 312
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 4.21e-18 5 228 30 267
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4MXN_A 6.20e-15 3 238 22 235
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
2UVE_A 5.84e-07 5 128 159 272
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]

Swiss-Prot Hits      download full data without filtering help

Created with Snap224466881101321541761982202422642863083303523743964185260sp|A7PZL3|PGLR_VITVI5232sp|Q8RY29|ADPG2_ARATH5234sp|Q9LW07|PGLR3_ARATH157260sp|P27644|PGLR_RHIRD5232sp|O23147|ADPG1_ARATH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 3.52e-23 5 260 65 314
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q8RY29 1.66e-09 5 232 70 275
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
Q9LW07 2.33e-09 5 234 26 223
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
P27644 1.77e-08 157 260 30 138
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
O23147 1.47e-06 5 232 70 275
Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000075 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000242_00210.