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CAZyme Information: MGYG000000006_02586

You are here: Home > Sequence: MGYG000000006_02586

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus xylosus
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus xylosus
CAZyme ID MGYG000000006_02586
CAZy Family GH3
CAZyme Description Beta-N-acetylglucosaminidase/beta-glucosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
574 MGYG000000006_23|CGC1 64476.74 5.066
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000006 2822527 Isolate United Kingdom Europe
Gene Location Start: 46034;  End: 47758  Strand: +

Full Sequence      Download help

MVKVNLKTSP  YNLDDTQIAW  VEETLKDLSN  EEKIGQLFFN  LFSLEDGKKF  HDADLSNKEV60
LERYHIGGAR  YEGGNKVDVQ  RLLNDLQQNT  KVPVLVAANC  DSGGNGACKD  GTYIASAAQC120
EAAQDTKVAY  NAGLVSAREA  SALGVHINFD  PCVDILKNWR  NTIVNTRSYG  TEAQTVIKYS180
SAFIDGFNSE  HDMITCIKHF  PGDGTEERDQ  HLVLGVNELS  TEEWDDSFRK  VYQHHIDRGV240
QMIMAGHIAQ  PAYSKKLNSN  LEDKDILPAT  LSKELITDLL  KDDMHFNGLV  VTDASHMLGM300
TAAMRREDYV  PLSIAAGCDM  FLFFNDLEED  YQFMLNGYNN  GVITDERLDD  AVRRILGLKA360
QLNLHKKQVD  GTIIRAKEDL  QVIGCQEHLD  MRAEAADLGI  TLVKNTLDQL  PIRPETHKNI420
RLYVIEGEKD  GIYKSANNVP  EDIIKELESR  GFNVTLNDGS  TRVKGKTLSY  REDVDAALVF480
ANIIGYAAEN  NYRIKWGTAM  SNEIPWYVHE  VPTVFVSLNF  TTHLHDATMV  KAYINAYHSN540
PESIKQTVDK  IMGLSTFKGS  YNDLVWTDKW  QAKL574

Enzyme Prediction      help

No EC number prediction in MGYG000000006_02586.

CAZyme Signature Domains help

Created with Snap28578611414317220022925828731534437340143045948751654587322GH3
Family Start End Evalue family coverage
GH3 87 322 1.2e-47 0.9768518518518519

CDD Domains      download full data without filtering help

Created with Snap28578611414317220022925828731534437340143045948751654528418BglX31358Glyco_hydro_3113326PRK053378425PRK15098
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1472 BglX 6.20e-60 28 418 1 356
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 1.60e-56 31 358 3 316
Glycosyl hydrolase family 3 N terminal domain.
PRK05337 PRK05337 1.68e-22 113 326 83 282
beta-hexosaminidase; Provisional
PRK15098 PRK15098 8.79e-19 8 425 26 416
beta-glucosidase BglX.

CAZyme Hits      help

Created with Snap2857861141431722002292582873153443734014304594875165451574AID41876.1|GH31574CEF17873.1|GH31574QDW88321.1|GH31574ARD75402.1|GH31574AID02322.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
AID41876.1 0.0 1 574 1 574
CEF17873.1 0.0 1 574 1 574
QDW88321.1 0.0 1 574 1 574
ARD75402.1 0.0 1 574 1 574
AID02322.1 0.0 1 574 1 574

PDB Hits      download full data without filtering help

Created with Snap28578611414317220022925828731534437340143045948751654565745VQD_A284453BMX_A284453LK6_A284454GYJ_A264096K5J_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5VQD_A 1.19e-112 6 574 6 567
Beta-glucosidephosphorylase BglX [unidentified],5VQE_A Beta-glucoside phosphorylase BglX bound to 2FGlc [unidentified]
3BMX_A 3.20e-42 28 445 42 477
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A 1.15e-41 28 445 16 451
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A 1.59e-41 28 445 46 481
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
6K5J_A 1.17e-31 26 409 9 386
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2857861141431722002292582873153443734014304594875165454574sp|Q7WUL3|NAG3_CELFI28445sp|P40406|NAGZ_BACSU59413sp|P48823|HEXA_PSEO751336sp|Q9KU37|NAGZ_VIBCH51336sp|C3LSU7|NAGZ_VIBCM
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q7WUL3 7.60e-118 4 574 2 564
Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1
P40406 1.75e-41 28 445 42 477
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823 2.30e-21 59 413 57 426
Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q9KU37 5.11e-21 51 336 11 285
Beta-hexosaminidase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=nagZ PE=1 SV=1
C3LSU7 5.11e-21 51 336 11 285
Beta-hexosaminidase OS=Vibrio cholerae serotype O1 (strain M66-2) OX=579112 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000076 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000006_02586.