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CAZyme Information: MGYG000000013_00224

You are here: Home > Sequence: MGYG000000013_00224

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp902362375
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375
CAZyme ID MGYG000000013_00224
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
861 MGYG000000013_1|CGC7 95244.65 5.0503
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000013 6368149 Isolate United Kingdom Europe
Gene Location Start: 310787;  End: 313372  Strand: -

Full Sequence      Download help

MNTGLKFALG  VCSLSLLFSC  AQKLPYQDTS  LTAEQRAEDL  LPRLTLEEKV  ALMQNASPAI60
PRLGIKEYDW  WNEALHGVGR  AGLATVFPQA  IGMGASFNDS  LLYEVFDAVS  DEARVKSRIF120
SENGVLKRYQ  GLTFWTPNVN  IFRDPRWGRG  QETYGEDPYL  TGQLGMAVVR  GLQGPEDSKY180
DKLHACAKHF  AVHSGPEWNR  HSFDAENIAP  RDLWETYLPA  FKDLVQKADV  KEVMCAYNRF240
EGEPCCGSNR  LLMQILRDEW  GYKGIVVSDC  GAISDFYRPE  THGTHPDKEH  ASAGAVLSGT300
DLECGGEYGS  LADAVKAGLI  DEKLIDVSLK  RLLTARFELG  EMDEQPAWAE  IPASTLNSKE360
HQDLALRMAR  ESLVLLQNKN  NILPLNTGLK  VAVMGPNAND  SVMQWGNYNG  IPGHTVTLLE420
AVRSKLPEGQ  VMYEPGCDRT  SREALQSLFS  ECSINGKPGF  LAEYWNNRTR  EGEVVATDQI480
STPFHFATTG  ATTFASGVEI  TDFSARYESV  FRPSQSGDVA  FRFQLDGEVT  LMVDGEQVAQ540
KVYVKNPTNL  YTLQAKAGKE  YHIEILFKQR  NERATLDFDL  GKQVEINLNL  AVEKVKDADV600
VLFAGGISPS  LEGEEMPVEV  SGFKGGDRTD  IELPAVQRDL  LRTLKKAGKK  VVFINYSGSA660
IGLVPESNTC  EAILQAWYPG  QAGGTAIVDV  LFGDYNPAGR  LPVTFYKDAG  QLPDFEDYSM720
KGRTYRYMQQ  QPLYPFGYGL  SYTTFIYGEA  NLGKNTIGKG  ETAMLTVPVS  NVGQRDGDEV780
VQVYLRSPAD  KDGPRYTLRA  FKRVHIPAGQ  TKSVTIPLTH  ESFEWFDEAT  NTMHPVAGTY840
ELLYGGSSDK  NKLKAIVMNV  Q861

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Created with Snap438612917221525830134438743047351655960264568873177481759304GH3
Family Start End Evalue family coverage
GH3 59 304 4.9e-68 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap438612917221525830134438743047351655960264568873177481711827PRK1509825823PLN0308028438BglX373742Glyco_hydro_3_C37335Glyco_hydro_3
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 3.46e-120 11 827 4 734
beta-glucosidase BglX.
PLN03080 PLN03080 1.80e-119 25 823 41 750
Probable beta-xylosidase; Provisional
COG1472 BglX 5.47e-73 28 438 14 396
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 2.16e-51 373 742 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 1.76e-43 37 335 39 316
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Created with Snap43861291722152583013443874304735165596026456887317748171861QNL40583.1|GH31861QQR19237.1|GH31861ANU59597.1|GH31861QDH54053.1|GH31861QRM99019.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
QNL40583.1 0.0 1 861 1 861
QQR19237.1 0.0 1 861 1 861
ANU59597.1 0.0 1 861 1 861
QDH54053.1 0.0 1 861 1 861
QRM99019.1 0.0 1 861 1 861

PDB Hits      download full data without filtering help

Created with Snap4386129172215258301344387430473516559602645688731774817368297VC7_A368297VC6_A508275Z87_A828586R5I_A828586R5O_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 8.79e-91 36 829 25 703
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 8.79e-91 36 829 25 703
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5Z87_A 5.55e-87 50 827 108 754
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
6R5I_A 2.83e-77 82 858 83 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A 1.42e-76 82 858 83 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap438612917221525830134438743047351655960264568873177481717860sp|D5EY15|XYL3A_PRER218860sp|Q94KD8|BXL2_ARATH23850sp|Q9LJN4|BXL5_ARATH29810sp|Q9SGZ5|BXL7_ARATH13816sp|Q9FGY1|BXL1_ARATH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 3.35e-306 17 860 15 861
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q94KD8 3.28e-106 18 860 30 765
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9LJN4 7.15e-101 23 850 38 763
Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2
Q9SGZ5 2.13e-95 29 810 41 722
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
Q9FGY1 2.52e-93 13 816 30 733
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000046 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000013_00224.