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CAZyme Information: MGYG000001276_00207

You are here: Home > Sequence: MGYG000001276_00207

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium limosum
Lineage Bacteria; Firmicutes_A; Clostridia; Eubacteriales; Eubacteriaceae; Eubacterium; Eubacterium limosum
CAZyme ID MGYG000001276_00207
CAZy Family GH3
CAZyme Description Thermostable beta-glucosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
873 MGYG000001276_2|CGC1 97450 4.8107
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001276 3903827 MAG Italy Europe
Gene Location Start: 10326;  End: 12947  Strand: +

Full Sequence      Download help

MDSSLITKLR  RKLNLEQMTS  LCSGENNWET  KSYEALGIPK  VVMSDGPHGL  RVEAEKEEGK60
IGVGDSLPAT  CFPPATLAAC  SFDESLIREM  ASAIAREARA  AGVDLILGPG  LNIKRSPLCG120
RNFEYYSEDP  YLSGHLAKAF  VEGVRKEHTG  ATLKHFFGNN  QETRRMTINA  LIDERALREI180
YLKGFEIAVK  EAGPMAVMCS  YNSVNGEFLS  QNKHFLTEIL  RNEWGFEGIV  MTDWGAVYDR240
VKGVKAGLDL  EMPGSGGVND  KKIFDAIKEG  KLKKTRLNET  AERLIAFALE  AEKNRQAAGT300
PEPVDINEQH  LLARRIAAES  MVLLKNEDSL  LPLDKEKLKT  IAVIGKMAFD  PRYQGSGSSK360
INPYRIEAPY  DAIAAEMADR  VKLLTAQGYS  DSSDEKHKRI  VKEAAETARK  ADVAVVFAGL420
PDKLESEGYD  RTSLKLPENQ  LEMIQRVCEE  QPNTIVVLFN  GGVVDLEFED  QPKAVLEAWL480
GGQAVGAAVS  DILFGCVNPS  GRLAETIPMR  LEDTPAYINF  PGTEDSVNYG  ESIFVGYRYY540
DYVNRSVRYP  FGFGLSYTTF  EYSDMKASAA  DDGTVIASCR  VKNTGERAGK  EVVQLYTGKL600
DGKVQRPVRE  LKGFTKIDLK  PGEEKVVVFE  LSKDDFTYFN  PTRNAWTQEE  GLYLISIGAS660
SRDIRLEAEV  ALPAPPLPKL  TRYSYMDDFM  ANPRGRQVIE  VIMSQFQSVT  GKTIDTGDAF720
FMTMLHGTPV  SKIVTFTNGL  LSDKSVDRIL  EFVNGEDDSE  TFDIRCLFEG  KEEKKNWFQS780
MLEGIFGKKE  DNAFYTVDCS  VRDLMANPET  RAVLAKYCPD  EYLNGEIMDM  IISMGVTMRK840
VQKLIPDEYY  PYSLLTTIDE  ELRLIPKDNK  EEM873

Enzyme Prediction      help

EC 3.2.1.21 3.2.1.58 3.2.1.37 3.2.1.-

CAZyme Signature Domains help

Created with Snap438713017421826130534939243648052356761165469874278582933253GH3
Family Start End Evalue family coverage
GH3 33 253 5.6e-72 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap438713017421826130534939243648052356761165469874278582936665PRK1509836382BglX321537Glyco_hydro_3_C32629PLN0308041285Glyco_hydro_3
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 1.30e-102 36 665 102 758
beta-glucosidase BglX.
COG1472 BglX 7.55e-73 36 382 58 392
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 1.38e-70 321 537 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
PLN03080 PLN03080 2.30e-63 32 629 70 740
Probable beta-xylosidase; Provisional
pfam00933 Glyco_hydro_3 1.00e-40 41 285 57 314
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Created with Snap43871301742182613053493924364805235676116546987427858291873ARD66349.1|GH31873ADO36019.1|GH31873QCT73105.1|GH31873ALU15816.1|GH31871AFA48424.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
ARD66349.1 0.0 1 873 1 873
ADO36019.1 0.0 1 873 1 873
QCT73105.1 0.0 1 873 1 873
ALU15816.1 0.0 1 873 1 873
AFA48424.1 0.0 1 871 1 868

PDB Hits      download full data without filtering help

Created with Snap438713017421826130534939243648052356761165469874278582967547MS2_A137055WAB_A296672X40_A296672X42_A66643AC0_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7MS2_A 3.95e-239 6 754 5 752
ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2]
5WAB_A 2.22e-185 13 705 12 697
CrystalStructure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_B Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_C Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_D Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703]
2X40_A 7.49e-134 29 667 42 708
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with glycerol [Thermotoga neapolitana DSM 4359],2X41_A Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose [Thermotoga neapolitana DSM 4359]
2X42_A 1.13e-132 29 667 42 708
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with alpha-D-glucose [Thermotoga neapolitana DSM 4359]
3AC0_A 8.17e-132 6 664 6 828
Crystalstructure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_B Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_C Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_D Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap43871301742182613053493924364805235676116546987427858296754sp|P14002|BGLB_ACET211735sp|E7CY69|APY_BIFLN11735sp|F6C6C1|APY_BIFBA2674sp|Q5BFG8|BGLB_EMENI5673sp|P27034|BGLS_RHIRD
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P14002 1.08e-238 6 754 5 752
Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2
E7CY69 5.71e-181 11 735 10 735
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium longum OX=216816 GN=apy PE=1 SV=1
F6C6C1 8.06e-181 11 735 10 735
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium breve (strain ACS-071-V-Sch8b) OX=866777 GN=HMPREF9228_1477 PE=1 SV=1
Q5BFG8 9.92e-129 2 674 7 840
Beta-glucosidase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=bglB PE=1 SV=1
P27034 3.77e-128 5 673 1 811
Beta-glucosidase OS=Rhizobium radiobacter OX=358 GN=cbg-1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001276_00207.