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CAZyme Information: MGYG000001296_00056

You are here: Home > Sequence: MGYG000001296_00056

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pediococcus acidilactici
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus acidilactici
CAZyme ID MGYG000001296_00056
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
735 MGYG000001296_1|CGC2 81703.25 6.0061
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001296 1929633 Isolate not provided not provided
Gene Location Start: 43525;  End: 45732  Strand: +

Full Sequence      Download help

MEETKLRKLF  NDLSDAEKVS  QTVQLNGDLF  VESWVMSTGP  KTDLGLPADF  NYYEIGSIYN60
VNDHRKLKKL  QTEVLEKSRH  RIPLLFMSDI  IYGFRTIFPM  PLAQAGSYNF  DLIQRAAAVT120
AKESYQNGLH  VVFSPMLDLV  RDPRWGRVME  SPGEDVYTAK  EFGRHVVRGY  QGELADGKIT180
RNHVAACIKH  FAAYGAPESG  REYNAVELSY  QKLYNEFLQP  YQAAIEAKAQ  LVMTAFNLLN240
GVPATGNRWL  NRKVLRDRFG  FEGVLDADYS  AIAELVNHGY  AANSQEAAQK  ALRAGVDLDM300
MTAVYANELP  KVLKNPEMRQ  LLDEAVWRIL  VLKNKLGLFE  NPFRGLDEPA  TGKILAEEDR360
ALATQLVEES  SVLLKNKSAL  PLRQDQKIAV  IGPYGESKLT  LGFWASVSGK  STDVVPLKEG420
LQAEFNPAQL  SFSRGYNLFD  SYEPFGPLKQ  GIELVNGPIE  DENLLLQQAE  KQAAAADVVV480
LTIGENFLES  GEGAAKAHLT  LPAKQKRLIQ  AVAKQGKPIV  GIVYTGRPLA  LTDVEPYFDS540
LLLVWFPGIM  GGTGIANLLS  GKASPSARLS  MTFPRSEGQL  PIYQARTPTG  RPLGESNHSD600
RFVSKYIDES  NEPLYPFGSG  LSYARFTGCW  RELHQDATTL  KGKFEVENLS  DRAAATVVQI660
YLKQFPAEIV  QPVKRLVKAV  KVQFTGAGKQ  VIDVEIPVAE  LAYFDNQGEK  HLEHIEYQFQ720
LDILGETSEI  NLKLN735

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Created with Snap367311014718322025729433036740444147751455158862466169876301GH3
Family Start End Evalue family coverage
GH3 76 301 7.8e-60 0.9861111111111112

CDD Domains      download full data without filtering help

Created with Snap367311014718322025729433036740444147751455158862466169854707PRK1509871398BglX17332Glyco_hydro_396627PLN03080372623Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 5.54e-180 54 707 76 736
beta-glucosidase BglX.
COG1472 BglX 1.10e-80 71 398 49 367
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 2.22e-67 17 332 4 316
Glycosyl hydrolase family 3 N terminal domain.
PLN03080 PLN03080 1.50e-61 96 627 112 637
Probable beta-xylosidase; Provisional
pfam01915 Glyco_hydro_3_C 4.32e-44 372 623 2 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap36731101471832202572943303674044414775145515886246616981735AZP90377.1|GH31735QAT21103.1|GH31735AOW73486.1|GH31735QIO85090.1|GH31735QYI95427.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
AZP90377.1 0.0 1 735 1 735
QAT21103.1 0.0 1 735 1 735
AOW73486.1 0.0 1 735 1 735
QIO85090.1 0.0 1 735 1 735
QYI95427.1 0.0 1 735 1 735

PDB Hits      download full data without filtering help

Created with Snap367311014718322025729433036740444147751455158862466169817104ZOA_A17104ZO6_A67076R5I_A67076R5O_A67076R5R_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4ZOA_A 2.33e-168 1 710 1 694
CrystalStructure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOA_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOB_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOB_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOD_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOD_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOE_A Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262],4ZOE_B Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262]
4ZO6_A 3.67e-167 1 710 1 694
CrystalStructure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO6_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO7_A Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO7_B Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO8_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO8_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO9_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZO9_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZOC_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262],4ZOC_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262]
6R5I_A 7.96e-140 6 707 7 704
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A 4.41e-139 6 707 7 704
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A 4.53e-139 6 707 8 705
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap367311014718322025729433036740444147751455158862466169854707sp|Q56078|BGLX_SALTY54707sp|P33363|BGLX_ECOLI92676sp|T2KMH0|PLH24_FORAG70733sp|T2KMH9|PLH34_FORAG3720sp|A7LXU3|BGH3B_BACO1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56078 5.77e-142 54 707 76 736
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363 6.94e-140 54 707 76 736
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH0 8.88e-80 92 676 84 661
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
T2KMH9 1.22e-79 70 733 109 748
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3 4.45e-71 3 720 36 760
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000048 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001296_00056.