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CAZyme Information: MGYG000001426_00402

You are here: Home > Sequence: MGYG000001426_00402

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytobacter massiliensis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Phytobacter; Phytobacter massiliensis
CAZyme ID MGYG000001426_00402
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
765 MGYG000001426_1|CGC5 83509.07 6.0043
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001426 4922332 Isolate not provided not provided
Gene Location Start: 439426;  End: 441723  Strand: +

Full Sequence      Download help

MKWLCSVGVA  VSLVLHPALA  EETSGKHPLT  PEARDAFVTE  LLKKMTVDEK  IGQLRLISVG60
PDNPKEAIRD  MIEKSQVGAI  FNTVTRQDIR  AMQDQAMQLS  RLKIPLFFAY  DVVHGQRTVF120
PISLGLASSF  NLDAVKTVGR  ISAYEAADDG  LNMTWAPMVD  VSRDPRWGRV  SEGFGEDTYL180
TATMGKAMVE  AMQGKSPADR  YSVMTSVKHF  AAYGAVEGGK  EYNTVDMSSQ  RLFNDYMPPY240
KAALDAGSGG  VMIALNSLNG  TPAASDSWLL  KELLRGDWKF  KGITISDHGA  IKELIKHGTA300
ADPEDAVRVA  IKSGVDMSMA  DEYYSKYLPG  LIKSGKVTMA  ELDDAARHVL  NVKYDMGLFN360
DPYSHLGPKE  SDPQDTNAES  RLHRKEAREI  AHESMVLLKN  RLETLPLKKS  GTIAVIGPLA420
DSKRDVMGSW  SAAGVVEQSV  TVLTGIKNVL  GDSGKVIYAK  GANLTDDKGI  VDFLNQYEPA480
VKVDERTPQA  MIDEAVKAAN  ESDVVVAVVG  EAQGMAHEAS  SRTDLKIPQS  QRDLITALKA540
TGKPLVLVLM  NGRPLALVKE  DQQADAILET  WFAGTEGGNA  IADVLFGDYN  PSGKLPMSFP600
RSVGQVPVYY  SHLNTGRPYN  ADNPNKYTSR  YFDEANGPLY  PFGYGLSYTT  FTVSDVKMSA660
PTMKRDGTVT  ASVEVTNSGK  RDGATVVQMY  VQDVTASMSR  PVKQLRGFEK  VTLKPGETQT720
VSFPIDVEAL  KFWNQRMKYD  AEPGKFNVFI  GLDSARVKQG  EFELQ765

Enzyme Prediction      help

EC 3.2.1.21 3.2.1.- 3.2.1.37

CAZyme Signature Domains help

Created with Snap387611415319122926730634438242045949753557361265068872698319GH3
Family Start End Evalue family coverage
GH3 98 319 3.2e-66 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap38761141531912292673063443824204594975355736126506887261765PRK1509846352Glyco_hydro_345452BglX87764PLN03080395648Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 0.0 1 765 1 765
beta-glucosidase BglX.
pfam00933 Glyco_hydro_3 4.80e-124 46 352 1 316
Glycosyl hydrolase family 3 N terminal domain.
COG1472 BglX 1.16e-115 45 452 1 389
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080 PLN03080 4.18e-83 87 764 64 775
Probable beta-xylosidase; Provisional
pfam01915 Glyco_hydro_3_C 3.84e-72 395 648 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap38761141531912292673063443824204594975355736126506887261764BCU54867.1|GH31765AGB77505.1|GH31764AUS66133.1|GH31764BAT44224.1|GH31764QST56869.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
BCU54867.1 0.0 1 764 1 764
AGB77505.1 0.0 1 765 1 765
AUS66133.1 0.0 1 764 1 764
BAT44224.1 0.0 1 764 1 764
QST56869.1 0.0 1 764 1 764

PDB Hits      download full data without filtering help

Created with Snap3876114153191229267306344382420459497535573612650688726347646R5I_A247646R5P_A347646R5O_A347646R5R_A307655XXL_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6R5I_A 0.0 34 764 3 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A 0.0 24 764 27 764
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A 0.0 34 764 3 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A 0.0 34 764 4 733
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
5XXL_A 7.87e-228 30 765 6 752
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Created with Snap38761141531912292673063443824204594975355736126506887261764sp|P33363|BGLX_ECOLI1764sp|Q56078|BGLX_SALTY72754sp|T2KMH0|PLH24_FORAG29765sp|T2KMH9|PLH34_FORAG9751sp|A7LXU3|BGH3B_BACO1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P33363 0.0 1 764 1 764
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q56078 0.0 1 764 1 764
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
T2KMH0 2.65e-128 72 754 33 710
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
T2KMH9 7.76e-116 29 765 34 755
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3 1.98e-105 9 751 8 762
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000228 0.999123 0.000178 0.000154 0.000145 0.000136

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001426_00402.