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CAZyme Information: MGYG000001552_00392

You are here: Home > Sequence: MGYG000001552_00392

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Butyricimonas synergistica
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Butyricimonas; Butyricimonas synergistica
CAZyme ID MGYG000001552_00392
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
991 MGYG000001552_7|CGC1 110573.79 7.7073
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001552 4964733 Isolate not provided not provided
Gene Location Start: 106009;  End: 108984  Strand: +

Full Sequence      Download help

MYRLILFFAI  FCLLSCPMTG  RAQSQWVDST  LNTMSLEEKI  GQLIMVAAYS  NKDSLYEKQL60
GETLEKYHIG  GIIFFQGSPE  KQALMTNDYQ  QQAIIPLMIG  MDAESGVGWR  IKPAMEFPNQ120
TLLGAIRDTN  LIYRIGQAIG  RQCHTMGIHV  NFAPVADINV  NPKNPVIGIR  SFGEKKDEVG180
NRSLQYTRGL  ESQQIMAVAK  HFPGHGDTDT  DSHFALPLIR  HSVARIDTVE  LYPFRQLIAA240
GIPGMMVAHL  NVPSYDSTNI  PASLSRHIVT  DLLRGKMHFD  GLCFTDAMNM  KGVTKGNSPG300
EADVKALVAG  NDILLFPENV  EATVKKVKAA  IHKGILTEEE  IDEKCRRVLA  AKEKYVLPNT360
GAIDTVMLTS  RLNTPADQAL  LQETYAEAIT  LIQNKDLLLP  LTNLDTLRIA  SLNFGDRKAK420
AFEGMLEKYA  PCAHFSIQAG  ANKDAIEELL  KDLSDYNCVI  VYNSAARNTI  SRQFGSSQVL480
SGILKQLKGK  RVIFCHPATP  YGLDIYSYLP  LDAILLSYSH  DTPAQEFAAQ  AIFGGIHVNG540
KLPVSINYYF  PVGTGLSTPK  VRLGYHKPES  SGMQSEILYR  IDSVCQEAIR  AKATPGCQVL600
VAKDGYVVYN  KAFGFNTYDK  KKANTTDNIY  DIASITKIAA  TLPAVMMLYD  QQVIALDTPI660
SRYSYAISQS  NKKDLTIREL  LLHNAGLKAS  FSFFSHAIDW  EKMQGRLFTS  KYTKTNTKKL720
RERLYVNPSF  KYRDSTFSFK  GGKDYLLVSP  HFYIHRHFQD  SIHTLLLNTD  LLPQKKYTYS780
DLGFVLLKDI  VEEQTITPFD  VYNRDHFLKR  LGAYNSGFNA  HLHLDMDRVI  PSSDDNVFRK840
SVLKGYVHDP  IAALMGGVSG  NAGLFSTAED  LAKIMSVYLN  HGQYGGEQII  DSATIDLFTC900
TQLPPEQNRR  GLGFDKPETL  PDKTGPTCEG  TPCTSYGHTG  FTGAIAWNDP  ENQLIYIFLS960
NRTYPNEFND  KLMKDNIRTK  IQEIIYEAIV  K991

Enzyme Prediction      help

No EC number prediction in MGYG000001552_00392.

CAZyme Signature Domains help

Created with Snap499914819824729734639644549554559464469374379284289194191315GH3
Family Start End Evalue family coverage
GH3 91 315 5.4e-57 0.9722222222222222

CDD Domains      download full data without filtering help

Created with Snap499914819824729734639644549554559464469374379284289194135349Glyco_hydro_334402BglX566989PRK03642581972Beta-lactamase550966AmpC
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00933 Glyco_hydro_3 5.11e-88 35 349 1 314
Glycosyl hydrolase family 3 N terminal domain.
COG1472 BglX 2.65e-87 34 402 1 351
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK03642 PRK03642 6.59e-43 566 989 28 431
putative periplasmic esterase; Provisional
pfam00144 Beta-lactamase 2.07e-40 581 972 1 318
Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.
COG1680 AmpC 5.65e-37 550 966 9 367
CubicO group peptidase, beta-lactamase class C family [Defense mechanisms].

CAZyme Hits      help

Created with Snap49991481982472973463964454955455946446937437928428919411991QRO49790.1|GH31989AZS31299.1|GH322989SNV44480.1|GH322989ADY34197.1|GH324991BAX80990.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
QRO49790.1 0.0 1 991 1 991
AZS31299.1 0.0 1 989 1 989
SNV44480.1 0.0 22 989 26 993
ADY34197.1 0.0 22 989 26 993
BAX80990.1 2.18e-279 24 991 43 1014

PDB Hits      download full data without filtering help

Created with Snap4999148198247297346396445495545594644693743792842891941284003BMX_A284003LK6_A284004GYJ_A343956K5J_A313563SQL_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3BMX_A 8.32e-67 28 400 36 446
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A 2.36e-66 28 400 10 420
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A 4.48e-66 28 400 40 450
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
6K5J_A 9.45e-66 34 395 11 379
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3SQL_A 1.60e-61 31 356 12 350
CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]

Swiss-Prot Hits      download full data without filtering help

Created with Snap499914819824729734639644549554559464469374379284289194128400sp|P40406|NAGZ_BACSU59548sp|P48823|HEXA_PSEO726402sp|Q7WUL3|NAG3_CELFI69322sp|Q2Y863|NAGZ_NITMU568972sp|B5BB26|YFEW_SALPK
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40406 4.55e-66 28 400 36 446
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823 2.89e-55 59 548 54 598
Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q7WUL3 3.41e-49 26 402 18 399
Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1
Q2Y863 1.62e-32 69 322 28 288
Beta-hexosaminidase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=nagZ PE=3 SV=1
B5BB26 1.28e-28 568 972 30 405
Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella paratyphi A (strain AKU_12601) OX=554290 GN=yfeW PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000785 0.726441 0.271992 0.000293 0.000243 0.000219

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001552_00392.