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CAZyme Information: MGYG000002459_00043

You are here: Home > Sequence: MGYG000002459_00043

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium animalis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium animalis
CAZyme ID MGYG000002459_00043
CAZy Family GH3
CAZyme Description Exo-alpha-(1->6)-L-arabinopyranosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
749 81408.61 4.5352
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002459 1958651 Isolate China Asia
Gene Location Start: 48034;  End: 50283  Strand: -

Full Sequence      Download help

MPHASQQNTT  PAHELPLEKR  AALTSGADAW  HLNGLSESTS  YMITDGPHGL  RKAAQSTSMD60
IEHSMPATCF  PPAAGMASSW  NPGLVREVGV  AIGEECVQEK  VAVLLGPGVN  IKRNPLGGRS120
FEFWSEDPYF  AGHEAIGIVE  GVQSTGVGTS  LKHFAANNQE  TDRMRIDARV  SERALREVYL180
PAFEHIVTKA  HPWTVMCAYN  QLNGTPCSQN  SWLLTKVLRD  EWGFDGVVIS  DWGAVHDRVE240
ALKAGLNLEM  PPTNTDEQVV  VAVRDGLLDE  DQLDRMAQGM  LDLIEKAAPA  MQQDDHPYDL300
VNHGAIARRA  AQESMVLLKN  DGGILPLAAD  GSVSIAVIGE  FARTPRYQGG  GSSKLTPTYV360
SSFLGSLHIR  DIPVDFSPGF  TLDDAKQDAA  LTAHAIDMAW  RNDVVLFFAG  LPEEAESEGF420
DRETIDLPQK  QLRLLADIVK  VNPNVVVVLS  NGSAVSVTPW  RDSVRGLLEG  WLLGQEGGNA480
LADVIFGDVS  PSSKLAQTIP  MSVLDDPSMP  NWPGEAGHVD  YGEGVFVGYR  YYDTFGRQVA540
YPFGYGMTYS  TFEIRNLSAI  PHDNTVQVSA  IVTNTGQVRA  SEVVQLYVAP  CACDAARPAH600
ELKGFEKITL  DPGEASIVTF  ELDSRSFAYW  SEPRNDWHVE  RGTYTIEIGS  SSRDIAERVQ660
VELPGDGIRL  PLTLSSTFDE  WSDDPIGGPI  LQAAINRLSQ  QEGHPIIPES  DMLRMLLGSM720
PMNATNVLLG  SAAGRLCERI  MGLYNASNQ749

Enzyme Prediction      help

EC 3.2.1.21 3.2.1.37 3.2.1.23 3.2.1.-

CAZyme Signature Domains help

Created with Snap377411214918722426229933737441144948652456159963667471141251GH3
Family Start End Evalue family coverage
GH3 41 251 4e-64 0.9444444444444444

CDD Domains      download full data without filtering help

Created with Snap377411214918722426229933737441144948652456159963667471168657PRK1509845342BglX315529Glyco_hydro_3_C67623PLN0308058283Glyco_hydro_3
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 5.99e-90 68 657 118 759
beta-glucosidase BglX.
COG1472 BglX 3.30e-67 45 342 67 364
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 1.02e-54 315 529 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
PLN03080 PLN03080 2.08e-53 67 623 111 743
Probable beta-xylosidase; Provisional
pfam00933 Glyco_hydro_3 2.14e-37 58 283 71 316
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Created with Snap37741121491872242622993373744114494865245615996366747111749ACS45445.1|GH31749QPB49311.1|GH31749AGO51558.1|GH31749AJD87822.1|GH31749AEN75825.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
ACS45445.1 0.0 1 749 1 749
QPB49311.1 0.0 1 749 1 749
AGO51558.1 0.0 1 749 1 749
AJD87822.1 0.0 1 749 1 749
AEN75825.1 0.0 1 749 1 749

PDB Hits      download full data without filtering help

Created with Snap377411214918722426229933737441144948652456159963667471177445WAB_A147417MS2_A416552X40_A416552X42_A146683AC0_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5WAB_A 0.0 7 744 3 743
CrystalStructure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_B Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_C Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_D Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703]
7MS2_A 3.26e-213 14 741 11 744
ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2]
2X40_A 1.89e-126 41 655 54 705
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with glycerol [Thermotoga neapolitana DSM 4359],2X41_A Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose [Thermotoga neapolitana DSM 4359]
2X42_A 2.88e-125 41 655 54 705
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with alpha-D-glucose [Thermotoga neapolitana DSM 4359]
3AC0_A 2.35e-114 14 668 12 845
Crystalstructure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_B Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_C Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_D Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap37741121491872242622993373744114494865245615996366747117744sp|E7CY69|APY_BIFLN7744sp|F6C6C1|APY_BIFBA14741sp|P14002|BGLB_ACET214671sp|P27034|BGLS_RHIRD43662sp|A7LXS8|BGH3A_BACO1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
E7CY69 0.0 7 744 3 752
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium longum OX=216816 GN=apy PE=1 SV=1
F6C6C1 0.0 7 744 3 752
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium breve (strain ACS-071-V-Sch8b) OX=866777 GN=HMPREF9228_1477 PE=1 SV=1
P14002 8.93e-213 14 741 11 744
Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2
P27034 1.01e-123 14 671 8 818
Beta-glucosidase OS=Rhizobium radiobacter OX=358 GN=cbg-1 PE=3 SV=1
A7LXS8 6.44e-119 43 662 83 744
Beta-glucosidase BoGH3A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02644 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999840 0.000207 0.000007 0.000001 0.000000 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002459_00043.