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CAZyme Information: MGYG000002935_00103

You are here: Home > Sequence: MGYG000002935_00103

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp002161765
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161765
CAZyme ID MGYG000002935_00103
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
782 MGYG000002935_1|CGC2 86851.95 4.996
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002935 2727252 MAG Finland Europe
Gene Location Start: 135806;  End: 138154  Strand: +

Full Sequence      Download help

MKNISKLALA  SVFCAGACLS  AGAQNVPPAI  PSDPVIEANI  QEWLQKMTLE  EKIGQMCEIT60
IDVVTDFEAS  MKHGFVLDKA  KLDTVIGKYK  VGSLLNVPLS  IAQPKEKWAE  AIKQIQELSM120
KEIGIPCIYG  VDQIHGTTYT  LGGTFFPQGV  NMGASFNRDL  VKREAEISAY  ETKAGCIPWT180
YAPVVDLGRD  PRWSRMWENY  GEDCYVNAEM  GKASVIGFQG  EDPNHIGPNH  VAACMKHYMG240
YGVPVSGKDR  TPSSISRSDM  REKHFAPYLE  AVRQGALSVM  VNSGVDNGMP  FHANKEYLTK300
WLKEDLNWDG  MIVTDWADIN  NLCTRDHIAA  TKKEAIKIAI  NAGIDMSMVP  YEVSFCDYLK360
ELVEEGEVPM  SRIDDAVARV  LRLKYRLGLF  DKPYWSTEDY  PKFGSEEFAQ  VALQAAEESE420
VLLKNEGGIL  PLAKGKKILL  AGPNANSMRC  LNGGWSYSWQ  GHRADECAQA  YNTIYEALCN480
KFGKENIIYE  PGVTYAPYKN  DNWWEENTPE  IEKSVEAARN  ADVIIACIGE  NSYCETPGNL540
TDLNLSANQQ  NLVKALAKTG  KPIILILNEG  RPRLIKDIEP  LAKAVVNIML  PGNYGGDALA600
NLLAGDANFS  AKMPYTYPKH  INALATYDYK  PCENIGQMGG  NYNYDSVMDI  QWPFGFGLSY660
TTYKYSNLKV  DKPQFTADDV  LTFSVDVTNT  GSMAGKESVL  LYSKDLVASS  TPDNIRLRNF720
EKISLNPGET  KTVTMTLKGS  DLAFVNYYGQ  WTLEKGDFKV  KCGDQWIDLQ  CTQTKVWDTP780
NK782

Enzyme Prediction      help

EC 3.2.1.21

CAZyme Signature Domains help

Created with Snap3978117156195234273312351391430469508547586625664703742121349GH3
Family Start End Evalue family coverage
GH3 121 349 2.3e-62 0.9768518518518519

CDD Domains      download full data without filtering help

Created with Snap39781171561952342733123513914304695085475866256647037421763PRK1509847465BglX48383Glyco_hydro_3113764PLN03080421660Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 7.80e-150 1 763 1 751
beta-glucosidase BglX.
COG1472 BglX 7.24e-79 47 465 1 386
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 6.18e-71 48 383 1 316
Glycosyl hydrolase family 3 N terminal domain.
PLN03080 PLN03080 4.15e-55 113 764 64 770
Probable beta-xylosidase; Provisional
pfam01915 Glyco_hydro_3_C 1.81e-51 421 660 2 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap39781171561952342733123513914304695085475866256647037421782ADY35485.1|GH31782ADY36471.1|GH31782QRM99675.1|GH31782QUT79256.1|GH31782QDM10337.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
ADY35485.1 0.0 1 782 1 782
ADY36471.1 0.0 1 782 1 782
QRM99675.1 0.0 1 782 1 781
QUT79256.1 0.0 1 782 1 781
QDM10337.1 0.0 1 782 1 781

PDB Hits      download full data without filtering help

Created with Snap3978117156195234273312351391430469508547586625664703742247825JP0_A407705XXL_A407705XXN_A407765TF0_A377636R5I_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JP0_A 0.0 24 782 1 759
Bacteroidesovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
5XXL_A 9.93e-109 40 770 14 745
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 5.33e-108 40 770 14 745
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
5TF0_A 1.23e-106 40 776 13 750
CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
6R5I_A 5.49e-100 37 763 4 719
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap39781171561952342733123513914304695085475866256647037421782sp|A7LXU3|BGH3B_BACO140769sp|Q23892|GLUA_DICDI37763sp|Q56078|BGLX_SALTY37763sp|P33363|BGLX_ECOLI121763sp|T2KMH0|PLH24_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7LXU3 0.0 1 782 1 781
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
Q23892 2.11e-148 40 769 80 818
Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
Q56078 4.82e-106 37 763 35 751
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363 3.61e-105 37 763 35 751
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH0 6.22e-100 121 763 61 707
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000834 0.570788 0.427408 0.000396 0.000305 0.000243

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002935_00103.