logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003172_00039

You are here: Home > Sequence: MGYG000003172_00039

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900555915
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900555915
CAZyme ID MGYG000003172_00039
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
975 107613.07 4.9128
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003172 1933519 MAG United States North America
Gene Location Start: 3666;  End: 6593  Strand: +

Full Sequence      Download help

MKKYCLPVIL  SAVLMLTSAG  KQKEVSFDSY  NHDFGTVNSK  QGAVSHRFRL  SNNGKTPVTV60
ARTSPSCDCI  QALIPESAIE  PGQSADILVV  LDPSGNVGKS  IRSVEIIDIN  GKTLGALSVE120
SDIEEAPFPG  NYPFRNTGLG  VEERVENLIS  LLTPEEKVGL  MMNKSVSVDR  LGIPSYNWWS180
EACHGIRQDG  YTVFPQPIGM  ASAFNPALVY  DVFSAVSDEA  RANWNRSDHD  IYGVGMGEIY240
YPGNPELTFW  CPNVNIFRDP  RWGRGQETCG  EDPYLNAVLG  VETVRGMQGD  DSRYFKTHAC300
AKHYAVHSGP  EPLRHTYNAS  VSMRDLWETY  LPAFKALVKK  GDVREVMCAY  NRYEGKPCCM360
SDRLLIDILR  RKWGFDGIIL  TDCDAINNFY  NKGQHETHSD  PMSASVDAVL  NGTDLECGKV420
FMSLTEALEK  GKIEEKDLDA  HLRRTLKGRF  ELGMFDPAHM  LPWSGMQEAV  ISSEPFHQLA480
VQAARESIVL  LDNDGVLPLD  SNVKKIAVVG  PNADDTSMLN  GNYGGTPTAA  HTSSLLDGIR540
DAFPSAEIIY  RKGCELDDDY  RTIPYMKDFN  DGKGLLVEFF  NNSDLSGDPA  VTAYHDRLNF600
STFGAWGFAE  GISKDTLSVR  VSGLWKAPFT  GDMSYNITTD  NGYILKINGK  TVEDTSGQAG660
RRGFGFNRKI  DYRQYPVIEG  DTYDICIEYR  HGASNFAMLR  GELCRRQLVE  FDDIASEVKD720
ADAIIVIGGI  SAQMEGEGGD  KDDIELPAVQ  QRLLKAMHST  GRPVIMVNCS  GSAIAFGSVE780
GDYDALIQAW  YPGQGGSQAL  AEVISGAYNP  GGKLPVTFYR  SNDDLPDFLD  YSMDNRTYRY840
FKGKPQYAFG  YGLSYTDFEI  GKGKLSRKSM  KKDGKVTLTV  PVTNTGKRHG  TETVQAYIEA900
LDYDDAPLKS  LKGFSKISLA  PGESGRAVIT  LDAEAFEFYD  PSVDELSPRS  GRYRILYGSS960
SRDEDLRALE  FTLKD975

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Created with Snap4897146195243292341390438487536585633682731780828877926167417GH3
Family Start End Evalue family coverage
GH3 167 417 3.1e-66 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap4897146195243292341390438487536585633682731780828877926127932PLN03080161973PRK15098161543BglX488855Glyco_hydro_3_C161446Glyco_hydro_3
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 9.24e-116 127 932 35 743
Probable beta-xylosidase; Provisional
PRK15098 PRK15098 4.82e-103 161 973 92 764
beta-glucosidase BglX.
COG1472 BglX 1.78e-68 161 543 48 387
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 2.27e-44 488 855 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 1.86e-38 161 446 54 314
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Created with Snap489714619524329234139043848753658563368273178082887792688974QCD36993.1|GH3132974QVJ80234.1|GH3132974ADE83440.1|GH3132970QRQ48937.1|GH3132970QUT44634.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
QCD36993.1 0.0 88 974 1 889
QVJ80234.1 0.0 132 974 23 869
ADE83440.1 0.0 132 974 23 869
QRQ48937.1 0.0 132 970 28 880
QUT44634.1 0.0 132 970 28 880

PDB Hits      download full data without filtering help

Created with Snap48971461952432923413904384875365856336827317808288779261449557VC7_A1449557VC6_A1089735A7M_A1089735AE6_A1339356Q7I_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 4.13e-84 144 955 25 715
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 4.13e-84 144 955 25 715
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5A7M_A 2.08e-76 108 973 16 753
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
5AE6_A 2.12e-76 108 973 16 753
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
6Q7I_A 4.18e-73 133 935 41 718
GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Created with Snap4897146195243292341390438487536585633682731780828877926133973sp|D5EY15|XYL3A_PRER2134931sp|Q94KD8|BXL2_ARATH122932sp|A5JTQ2|XYL1_MEDSV122949sp|Q9FLG1|BXL4_ARATH122919sp|A5JTQ3|XYL2_MEDSV
Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 5.28e-230 133 973 23 861
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q94KD8 3.83e-94 134 931 44 723
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
A5JTQ2 2.24e-93 122 932 42 738
Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1
Q9FLG1 2.79e-93 122 949 47 762
Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1
A5JTQ3 5.96e-93 122 919 42 725
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001338 0.468555 0.529460 0.000279 0.000188 0.000160

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003172_00039.