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CAZyme Information: MGYG000004282_00238

You are here: Home > Sequence: MGYG000004282_00238

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_D sp000434695
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_D; Ruminococcus_D sp000434695
CAZyme ID MGYG000004282_00238
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
684 MGYG000004282_1|CGC2 74821.68 4.9102
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004282 2340138 MAG China Asia
Gene Location Start: 260096;  End: 262150  Strand: -

Full Sequence      Download help

MDRFKKKAKE  LVSQMTAEEK  CSQLKYDSPA  IERLGIPAYN  WWNEGLHGVA  RAGTATMFPQ60
AIGMAAAFDT  EMMHRIGTAI  SLEARAKYNY  ASAEGDRDIY  KGLTLWSPNV  NIFRDPRWGR120
GHETYGEDPY  LAAELGVNFV  KGIQGDGEHL  RAAACAKHFA  VHSGPEALRH  EFNAEVNQKD180
LAETYLYAFE  KLVKSGVAGV  MGAYNRVNGE  PACANKKLMK  KLYGEWEFGG  YFVSDCWAIS240
DFHTHHMVTG  TAAESAAMAV  KAGCDINCGN  TYIHLMAAIE  QGLIEEADID  RAVEKAMEIR300
LRLGMLEETE  YDNIPFDVID  CPEHNALSLE  AAEKSMVLLK  NRAFLPLDKH  RIKSIAVIGP360
NADSRAALYG  NYQGTASRYV  TFLEGIEDAF  GGRVYYAEGC  HLFKDRVEGL  ALPADRISEA420
VAAAKNADVS  VLCLGLDASL  EGEEGDAGNA  YASGDKTDLR  LPEPQRLLLK  SVLDVGKPVV480
VVLAAGSSLN  IEDDRPAALI  QAWYPGSKGG  KALAEILFGE  VSPSGKLPVT  FYESDEALPD540
FCDYSMAQRT  YKNVKGNVLY  PFGFGLTYSS  MYVKIARCEG  GEVVCTAENI  GDTDTGEVLE600
VYCRSMGAFA  PKNPALCGFA  RIFLKAGESA  EFHVKLSEDA  FTDVDDNGVR  GVYSEEYLLY660
VGFSQPDEKS  EALGAGRGIW  IRRR684

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Created with Snap346810213617120523927330734237641044447851354758161564930268GH3
Family Start End Evalue family coverage
GH3 30 268 9.1e-71 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap34681021361712052392733073423764104444785135475816156494631PLN0308010640PRK1509829402BglX336568Glyco_hydro_3_C33295Glyco_hydro_3
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 4.99e-159 4 631 49 737
Probable beta-xylosidase; Provisional
PRK15098 PRK15098 8.68e-103 10 640 40 729
beta-glucosidase BglX.
COG1472 BglX 3.37e-73 29 402 53 397
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 2.29e-68 336 568 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 6.97e-46 33 295 63 312
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Created with Snap34681021361712052392733073423764104444785135475816156491681CBL34024.1|GH37670CCO04977.1|GH31681CBK95705.1|GH37673ADU23372.1|GH37679AEE64772.1|GH3|3.2.1.37
Hit ID E-Value Query Start Query End Hit Start Hit End
CBL34024.1 0.0 1 681 1 687
CCO04977.1 3.28e-315 7 670 14 676
CBK95705.1 1.91e-311 1 681 1 685
ADU23372.1 3.08e-301 7 673 14 679
AEE64772.1 3.64e-295 7 679 14 685

PDB Hits      download full data without filtering help

Created with Snap346810213617120523927330734237641044447851354758161564976617VC7_A76617VC6_A46595A7M_A46595AE6_A56596Q7I_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 2.59e-104 7 661 25 717
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 2.59e-104 7 661 25 717
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5A7M_A 2.21e-87 4 659 49 739
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
5AE6_A 2.26e-87 4 659 49 739
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
6Q7I_A 6.27e-87 5 659 50 737
GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Created with Snap34681021361712052392733073423764104444785135475816156495673sp|D5EY15|XYL3A_PRER26665sp|Q9SGZ5|BXL7_ARATH7659sp|Q9FGY1|BXL1_ARATH7662sp|Q94KD8|BXL2_ARATH10662sp|Q9FLG1|BXL4_ARATH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 4.99e-136 5 673 32 857
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q9SGZ5 3.57e-131 6 665 47 760
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
Q9FGY1 1.20e-126 7 659 59 716
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1
Q94KD8 9.29e-124 7 662 54 750
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9FLG1 1.91e-119 10 662 72 774
Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004282_00238.