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CAZyme Information: MGYG000004731_00100

You are here: Home > Sequence: MGYG000004731_00100

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium italicum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium italicum
CAZyme ID MGYG000004731_00100
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
775 84344.2 4.4322
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004731 1853599 MAG China Asia
Gene Location Start: 7554;  End: 9881  Strand: -

Full Sequence      Download help

MTETTHPYLD  ATLTIPERVQ  DLLSRMTLEE  KVGQMMQLDA  RSGDLEHLIV  DRHVGSILHT60
SPDDLVRADG  IVHGKTRLGI  PLLVGDDCIH  GYSFWPGATI  FPSQLGMACS  WDAEKVERAA120
RVTAEEVSCT  GVHWTFSPVL  CIGRDTRWGR  IDETFGEDPT  LIGELASAMV  QGYQKHARTG180
EAFDGDAILA  CAKHFAGYSY  TQGGRDASEA  DLTRRALASW  FLPPFERVAK  EGCATFMLGY240
EAIDGTPVTF  NDWLLQTKLR  GDWGYGGTLV  TDWDNVGRAV  WEQRIKPDYR  TAAADAVKAG300
NDLIMTTPGF  YEGAIEAVRD  GLLDERALDA  AVGRLLTLKF  QLGLFEDPRL  PDPERIEAVV360
GNDDHMDANL  ELTRESIVLL  RNNAALPLAA  ENGSLRTIAV  VGPLADDAQN  QLGDWAGNSG420
QVPWMPQGQP  RDMIMTVLDG  VRELAPEGCE  VIYARGADVV  ELIDDPAGAL  YPDGQPRPKL480
AVSAGVDDAL  LDEAVEQARR  ADAVIAVVGD  VVQLTGETCS  TATLDLRNGQ  NLLLERLSEV540
ARETHKPLIV  VLMSSKPQVL  PACVIGENGV  IVDESAADGL  GAFIWAPNPG  MQGGRALAEI600
IFGVTEPSGR  LPITFPRHAG  QLPVFYNQIR  GQHGDRYADL  TQDPAFAFGE  GLAYTTFEYG660
EPAIVNGSEF  RKGDTVRVEI  GLTNTGSRRG  TEIVQLYVSD  VVTSFTWAAK  ELKQFQRVTL720
EAGETRRVVF  ELPVDMCTIV  DGDARRIVEP  GEFKVLVGHS  SRDADLRSTT  FTVVE775

Enzyme Prediction      help

EC 3.2.1.21

CAZyme Signature Domains help

Created with Snap387711615519323227131034838742646550354258162065869773674305GH3
Family Start End Evalue family coverage
GH3 74 305 5.9e-69 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap387711615519323227131034838742646550354258162065869773619772PRK1509826416BglX2758PLN0308027338Glyco_hydro_3377654Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 1.39e-158 19 772 38 763
beta-glucosidase BglX.
COG1472 BglX 9.91e-85 26 416 1 372
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080 PLN03080 9.72e-73 2 758 36 769
Probable beta-xylosidase; Provisional
pfam00933 Glyco_hydro_3 2.46e-64 27 338 1 316
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 3.84e-45 377 654 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap38771161551932322713103483874264655035425816206586977363775AXM93048.1|GH33775QRI05315.1|GH33775QBA09245.1|GH33775AFJ18843.1|GH33775ASL78318.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
AXM93048.1 0.0 3 775 5 776
QRI05315.1 0.0 3 775 5 776
QBA09245.1 0.0 3 775 5 776
AFJ18843.1 0.0 3 775 20 791
ASL78318.1 0.0 3 775 5 776

PDB Hits      download full data without filtering help

Created with Snap387711615519323227131034838742646550354258162065869773627735Z9S_A197735XXL_A197735XXN_A197625TF0_A197706R5I_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z9S_A 0.0 2 773 11 787
Functionaland Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum],5Z9S_B Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum]
5XXL_A 8.85e-129 19 773 14 751
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 4.84e-128 19 773 14 751
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
5TF0_A 2.60e-124 19 762 13 741
CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
6R5I_A 7.79e-121 19 770 7 731
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap387711615519323227131034838742646550354258162065869773619761sp|Q56078|BGLX_SALTY15773sp|T2KMH0|PLH24_FORAG19761sp|P33363|BGLX_ECOLI19759sp|Q23892|GLUA_DICDI8771sp|T2KMH9|PLH34_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56078 4.90e-115 19 761 38 754
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
T2KMH0 2.50e-114 15 773 33 722
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
P33363 2.97e-112 19 761 38 754
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q23892 7.72e-89 19 759 80 813
Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
T2KMH9 1.32e-75 8 771 29 752
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004731_00100.