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CAZyme Information: MGYG000001765_00422

You are here: Home > Sequence: MGYG000001765_00422

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-448 sp000433415
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; CAG-448; CAG-448 sp000433415
CAZyme ID MGYG000001765_00422
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
445 MGYG000001765_9|CGC1 50290.65 4.9698
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001765 2169338 MAG Denmark Europe
Gene Location Start: 11365;  End: 12702  Strand: +

Full Sequence      Download help

MRITADFSDI  TGAVKPMHGV  GQAPFYCEDF  SLLHYLRDAG  VPFARLHDVG  NWLGGGLYVD60
IPNLFRNFDA  DPNDPAAYDF  AFTDRLLCQL  VENGVEPFFR  LGVSIENSHD  LRAYRIFPPR120
DPEKWAAICE  GIVRHYNEGW  ADGYRMGIRY  WEIWNEPDDC  FRPAESPMWQ  GTREEYYRLY180
EITSKRLRAA  FGNSIRIGGY  ASCGFYAGDD  YPDPAQIGQT  PNDRMHFFFY  FLDGFLRHVR240
DTGSPFDFFS  WHTYADVETA  CRHANTCRAI  LNAYGFADVP  DILDEWNTCF  DVRLRSSAMA300
ASRALAMMLA  MQDRSPSLLC  YYDARIGPSA  YGGMFNPDTW  EPYKTYEAFY  AFGEAYRMGR360
QIAVRTEQKA  DGVQVMGAVR  GDGHAGLLLF  ANPTACAVPV  TVDCRGLRPQ  SLVLTDDTHT420
RAALPFPADG  ALVLPPYSCF  CVRGE445

Enzyme Prediction      help

No EC number prediction in MGYG000001765_00422.

CAZyme Signature Domains help

Created with Snap2244668911113315517820022224426728931133335637840042271390GH39
Family Start End Evalue family coverage
GH39 71 390 1.5e-32 0.7308584686774942

CDD Domains      download full data without filtering help

Created with Snap2244668911113315517820022224426728931133335637840042254288Glyco_hydro_39
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01229 Glyco_hydro_39 2.46e-15 54 288 53 273
Glycosyl hydrolases family 39.

CAZyme Hits      help

Created with Snap224466891111331551782002222442672893113333563784004221424AVM69820.1|GH3911387QJD82796.1|GH3912392QTH43246.1|GH3911387QJD85864.1|GH395436AVM46100.1|GH39
Hit ID E-Value Query Start Query End Hit Start Hit End
AVM69820.1 5.47e-113 1 424 1 412
QJD82796.1 1.40e-64 11 387 11 374
QTH43246.1 7.99e-63 12 392 12 378
QJD85864.1 9.09e-57 11 387 12 380
AVM46100.1 3.31e-55 5 436 6 423

PDB Hits      download full data without filtering help

Created with Snap2244668911113315517820022224426728931133335637840042223925Z3K_A782934EKJ_A782934M29_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z3K_A 7.08e-26 2 392 8 376
Crystalstructure of glucosidase from Croceicoccus marinus at 1.8 Angstrom resolution [Croceicoccus marinus],5Z3K_B Crystal structure of glucosidase from Croceicoccus marinus at 1.8 Angstrom resolution [Croceicoccus marinus]
4EKJ_A 7.94e-09 78 293 81 288
ChainA, Beta-xylosidase [Caulobacter vibrioides]
4M29_A 7.94e-09 78 293 81 288
Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000033 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001765_00422.