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CAZyme Information: MGYG000001159_00253

You are here: Home > Sequence: MGYG000001159_00253

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium pullorum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium pullorum
CAZyme ID MGYG000001159_00253
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
428 MGYG000001159_12|CGC1 47207.62 4.3643
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001159 2232439 MAG Austria Europe
Gene Location Start: 126875;  End: 128161  Strand: -

Full Sequence      Download help

MRFGVNYTPS  NGWFHSWLNP  DWQSVDRDLE  QIAELGMDHV  RIFPVWPYLQ  PNRTWINRKG60
IEDVRRMVHI  AGEHGLDVYV  DVFQGHLSSF  DFLPSWLVTW  HTGNMFTDPD  AVAAECELIR120
VLGGELSQEP  AFKGITVGNE  VNQLSDRPHP  TKMVATPAQI  DAWLDATLEA  AGTAGGDALY180
SVNDGVWFLD  GHPFTPVQSG  NKGDMTTIHA  WVFNGTAQGY  GATSEECSAY  ALYLAELSKA240
FSGDPERPVW  LQEVGAPENV  LETADTPEFC  RRTVLNALDC  PNLWGVTWWC  SHDVAASMSD300
FPEFEHALGL  FDEHGELKPI  GRMFGDLARE  HRDHTKPAPR  TTAIVVDVDA  DGNPLDRSAC360
GPGGSVCDLW  MKAHCEGLRP  TVVTSDVAAD  PARLAALGVT  ELIRDTDPHP  ARFYTAVSDS420
SFEDLDEA428

Enzyme Prediction      help

No EC number prediction in MGYG000001159_00253.

CAZyme Signature Domains help

Created with Snap2142648510712814917119221423525627829932134236338540615294GH5
Family Start End Evalue family coverage
GH5 15 294 2.7e-124 0.9964539007092199

CDD Domains      download full data without filtering help

Created with Snap21426485107128149171192214235256278299321342363385406480GH113_mannanase-like
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd19608 GH113_mannanase-like 0.008 4 80 5 81
Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.

CAZyme Hits      help

Created with Snap214264851071281491711922142352562782993213423633854061426QAY32595.1|GH5_181426AIW44813.1|GH5_181426CBK70291.1|GH5_181426ADQ02913.1|GH5_181426QOL47075.1|GH5_18
Hit ID E-Value Query Start Query End Hit Start Hit End
QAY32595.1 1.06e-296 1 426 1 426
AIW44813.1 6.02e-252 1 426 1 426
CBK70291.1 6.02e-252 1 426 1 426
ADQ02913.1 6.02e-252 1 426 1 426
QOL47075.1 6.02e-252 1 426 1 426

PDB Hits      download full data without filtering help

Created with Snap2142648510712814917119221423525627829932134236338540614267LR1_A14267LR6_A24267LQX_A14236MP2_A14236MOY_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7LR1_A 5.37e-252 1 426 21 446
ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_A Chain A, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LR6_A 4.40e-251 1 426 21 446
ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LQX_A 5.28e-223 2 426 25 449
ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088]
6MP2_A 1.10e-171 1 423 21 445
Crystalstructure of BlMan5B solved by SIRAS [Bifidobacterium longum DJO10A],6MP2_B Crystal structure of BlMan5B solved by SIRAS [Bifidobacterium longum DJO10A],6MPA_A Chain A, BlMan5B [Bifidobacterium longum DJO10A],6MPA_B Chain B, BlMan5B [Bifidobacterium longum DJO10A]
6MOY_A 8.96e-171 1 423 21 445
Crystalstructure of the E257A mutant of BlMan5B in complex with GlcNAc (co-crystallization) [Bifidobacterium longum DJO10A],6MOY_B Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (co-crystallization) [Bifidobacterium longum DJO10A],6MP7_A Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (soaking) [Bifidobacterium longum DJO10A],6MP7_B Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (soaking) [Bifidobacterium longum DJO10A],6MPC_A Crystal structure of E257A mutant of BlMan5B [Bifidobacterium longum DJO10A],6MPC_B Crystal structure of E257A mutant of BlMan5B [Bifidobacterium longum DJO10A]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001159_00253.