logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000238_00075

You are here: Home > Sequence: MGYG000000238_00075

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterococcus_D casseliflavus
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_D; Enterococcus_D casseliflavus
CAZyme ID MGYG000000238_00075
CAZy Family GH67
CAZyme Description Xylan alpha-(1->2)-glucuronosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
652 MGYG000000238_1|CGC1 75388.73 4.9592
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000238 3499694 Isolate China Asia
Gene Location Start: 83905;  End: 85863  Strand: +

Full Sequence      Download help

MRKKDECWLK  KRVATDVVST  YSFEQSDQLT  DTIKREMQLL  FPMCRCVEET  NAELYFKKAT60
DALLEDEGFE  ISHEHNQTVV  YANTSKGWLY  GFFELYKHVI  RTTELPENLR  SIPNQAIRMV120
NHWDNFDGTI  ERGYAGESIF  YSNNQFRQDH  ETVRDYARFL  ASIGMNAVSI  NNVNVRGDAK180
WFITEPYLIE  IKKIADTFAA  YGIRTFLSIN  FAAPISVGGL  TTADPLAEEV  IAFWQKTADT240
IYQVMPDFGG  FVVKADSEGE  PGSFVYGRDH  NDGANMLARA  LQPYGGLLIW  RCFVYDCLQD300
WRDRSIDRAK  AAYDHFMKLD  GTFEENVILQ  IKNGPIDFQV  REPVMPLFGA  LKYTNQMLEF360
QVTQEYTGQQ  KHICCLLPMW  KDVLDFDTKH  PLEHATVKKI  LPEQSPNPKY  SGVAAVVNVG420
MDDNWTGHKL  AQANLFSYGR  LIWNNELSTE  AILCEWIDLS  FELDDSAKKR  LLAILATSYQ480
TYENYTAPLG  IGFMVRPNHH  YGPDVDGYEY  DRWGTYHFAD  RKGIGVNRTL  KDGTGYVRQY540
ADAWCETYEN  VETCPDELVL  FFHHLPYDHV  LQSGKTIIQH  IYDTHFEGYE  KVEEYVTEWA600
SLQGQIDEES  YQNVAERLQE  QVRSARDWRD  QINTYFYRKS  GIPDAHGRQI  YA652

Enzyme Prediction      help

EC 3.2.1.139 3.2.1.131

CAZyme Signature Domains help

Created with Snap32659713016319522826029332635839142345648952155458661947648GH67
Family Start End Evalue family coverage
GH67 47 648 1.4e-270 0.8968609865470852

CDD Domains      download full data without filtering help

Created with Snap32659713016319522826029332635839142345648952155458661964651AguA2108424Glyco_hydro_67M426648Glyco_hydro_67C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3661 AguA2 0.0 64 651 91 682
Alpha-glucuronidase [Carbohydrate transport and metabolism].
pfam07488 Glyco_hydro_67M 0.0 108 424 12 324
Glycosyl hydrolase family 67 middle domain. Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans. This family represents the central catalytic domain of alpha-glucuronidase.
pfam07477 Glyco_hydro_67C 1.25e-129 426 648 1 222
Glycosyl hydrolase family 67 C-terminus. Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans. This family represents the C terminal region of alpha-glucuronidase which is mainly alpha-helical. It wraps around the catalytic domain (pfam07488), making additional interactions both with the N-terminal domain (pfam03648) of its parent monomer and also forming the majority of the dimer-surface with the equivalent C-terminal domain of the other monomer of the dimer.

CAZyme Hits      help

Created with Snap3265971301631952282602933263583914234564895215545866191652QGN31111.1|GH671652QOG32395.1|GH671652ATF73792.1|GH671652AUJ87400.1|GH671652AYJ46832.1|GH67
Hit ID E-Value Query Start Query End Hit Start Hit End
QGN31111.1 0.0 1 652 1 652
QOG32395.1 0.0 1 652 1 652
ATF73792.1 0.0 1 652 1 652
AUJ87400.1 0.0 1 652 1 652
AYJ46832.1 0.0 1 652 1 652

PDB Hits      download full data without filtering help

Created with Snap326597130163195228260293326358391423456489521554586619806511MQP_A806511K9D_A806511MQR_A806511K9E_A736431GQI_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1MQP_A 5.18e-258 80 651 106 678
TheCrystal Structure Of Alpha-D-Glucuronidase From Bacillus Stearothermophilus T-6 [Geobacillus stearothermophilus]
1K9D_A 1.04e-257 80 651 106 678
The1.7 A crystal structure of alpha-D-glucuronidase, a family-67 glycoside hydrolase from Bacillus stearothermophilus T-1 [Geobacillus stearothermophilus],1L8N_A The 1.5A crystal structure of alpha-D-glucuronidase from Bacillus stearothermophilus T-1, complexed with 4-O-methyl-glucuronic acid and xylotriose [Geobacillus stearothermophilus],1MQQ_A THE CRYSTAL STRUCTURE OF ALPHA-D-GLUCURONIDASE FROM BACILLUS STEAROTHERMOPHILUS T-1 COMPLEXED WITH GLUCURONIC ACID [Geobacillus stearothermophilus]
1MQR_A 1.48e-257 80 651 106 678
ChainA, ALPHA-D-GLUCURONIDASE [Geobacillus stearothermophilus]
1K9E_A 2.97e-257 80 651 106 678
ChainA, alpha-D-glucuronidase [Geobacillus stearothermophilus],1K9F_A Chain A, alpha-D-glucuronidase [Geobacillus stearothermophilus]
1GQI_A 2.02e-135 73 643 105 670
Structureof Pseudomonas cellulosa alpha-D-glucuronidase [Cellvibrio japonicus],1GQI_B Structure of Pseudomonas cellulosa alpha-D-glucuronidase [Cellvibrio japonicus],1GQJ_A Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with xylobiose [Cellvibrio japonicus],1GQJ_B Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with xylobiose [Cellvibrio japonicus],1GQK_A Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid [Cellvibrio japonicus],1GQK_B Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid [Cellvibrio japonicus],1GQL_A Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid and xylotriose [Cellvibrio japonicus],1GQL_B Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid and xylotriose [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap32659713016319522826029332635839142345648952155458661980651sp|Q09LY5|AGUA_GEOSE61651sp|P96105|AGUA_THEMA66648sp|Q5AQZ4|AGUA_EMENI64648sp|Q96WX9|AGUA_ASPNG64648sp|A2R3X3|AGUA_ASPNC
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q09LY5 2.84e-257 80 651 106 678
Xylan alpha-(1->2)-glucuronosidase OS=Geobacillus stearothermophilus OX=1422 GN=aguA PE=1 SV=1
P96105 2.67e-226 61 651 80 673
Xylan alpha-(1->2)-glucuronosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=aguA PE=1 SV=2
Q5AQZ4 5.86e-166 66 648 112 699
Alpha-glucuronidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=aguA PE=1 SV=1
Q96WX9 6.96e-166 64 648 110 692
Probable alpha-glucuronidase A OS=Aspergillus niger OX=5061 GN=aguA PE=2 SV=1
A2R3X3 1.39e-165 64 648 110 692
Probable alpha-glucuronidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=aguA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000238_00075.