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CAZyme Information: MGYG000001054_00177

You are here: Home > Sequence: MGYG000001054_00177

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Succinivibrio sp900555115
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Succinivibrionaceae; Succinivibrio; Succinivibrio sp900555115
CAZyme ID MGYG000001054_00177
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
330 MGYG000001054_10|CGC1 36596.93 7.9244
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001054 2025835 MAG Spain Europe
Gene Location Start: 14543;  End: 15535  Strand: +

Full Sequence      Download help

MDDTSLIRSR  DATDVGLKAD  IRGMSRLKSL  GSGDKKAQAQ  ALKAAAEQFE  QLLTQYWVDG60
MRGSNSSLDP  NSPLHSKYSR  MFEDMLSQEQ  VGMTSTRSGK  ISKSSITYLI  AKQFSKSLGD120
EGKELLKELT  DGSSVRPENF  SSSYAKRDYS  SYLDPSSCEA  RFVKGLSSIY  GDLPKDSLKS180
FESQEDFVNK  LMPYALKAVE  GQGFNPLVLV  AQAALETGWG  RHVPSGNNFY  GIKADASWRG240
DKQDLSSPEF  EQGSFVSRVS  SFRSYAGVLD  SMKDYIDFIK  GNPRYERAVG  RSFDTDGYFD300
EIARAGYATD  PAYADKLKNI  SRKIAFMAYK  330

Enzyme Prediction      help

No EC number prediction in MGYG000001054_00177.

CAZyme Signature Domains help

Created with Snap163349668299115132148165181198214231247264280297313192324GH73
Family Start End Evalue family coverage
GH73 192 324 2.7e-29 0.96875

CDD Domains      download full data without filtering help

Created with Snap16334966829911513214816518119821423124726428029731349324flgJ17325flagell_FlgJ183330FlgJ185321flgJ49320flgJ
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05684 flgJ 5.34e-51 49 324 39 297
flagellar assembly peptidoglycan hydrolase FlgJ.
TIGR02541 flagell_FlgJ 8.82e-44 17 325 1 294
flagellar rod assembly protein/muramidase FlgJ. The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring.
COG1705 FlgJ 1.29e-38 183 330 42 188
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
PRK12711 flgJ 9.98e-31 185 321 216 355
flagellar assembly peptidoglycan hydrolase FlgJ.
PRK12710 flgJ 1.20e-27 49 320 36 272
flagellar rod assembly protein/muramidase FlgJ; Provisional

CAZyme Hits      help

Created with Snap1633496682991151321481651811982142312472642802973139329AHE50164.1|GH739329QSE74006.1|GH7331324QQQ68301.1|GH7327320AOT12355.1|GH7327320AOT17268.1|GH73
Hit ID E-Value Query Start Query End Hit Start Hit End
AHE50164.1 2.31e-54 9 329 6 355
QSE74006.1 5.82e-54 9 329 6 351
QQQ68301.1 1.02e-53 31 324 27 307
AOT12355.1 1.78e-53 27 320 25 311
AOT17268.1 1.78e-53 27 320 25 311

PDB Hits      download full data without filtering help

Created with Snap1633496682991151321481651811982142312472642802973131873203VWO_A1873202ZYC_A1873203K3T_A1853305DN4_A1853285DN5_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3VWO_A 1.73e-23 187 320 4 142
Crystalstructure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1 [Sphingomonas sp. A1]
2ZYC_A 2.18e-23 187 320 5 143
ChainA, Peptidoglycan hydrolase FlgJ [Sphingomonas sp. A1]
3K3T_A 1.58e-22 187 320 5 143
E185Amutant of peptidoglycan hydrolase from Sphingomonas sp. A1 [Sphingomonas sp. A1]
5DN4_A 4.78e-21 185 330 4 154
Structureof the glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
5DN5_A 8.85e-21 185 328 4 152
Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

Swiss-Prot Hits      download full data without filtering help

Created with Snap16334966829911513214816518119821423124726428029731310327sp|Q9X9J3|FLGJ_VIBPA11324sp|Q9KQ15|FLGJ_VIBCH24324sp|Q9I4P4|FLGJ_PSEAE20330sp|P58231|FLGJ_ECO57185330sp|P15931|FLGJ_SALTY
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9X9J3 9.43e-48 10 327 3 308
Peptidoglycan hydrolase FlgJ OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=flgJ PE=3 SV=1
Q9KQ15 2.07e-40 11 324 4 306
Peptidoglycan hydrolase FlgJ OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=flgJ PE=3 SV=2
Q9I4P4 1.23e-32 24 324 21 385
Peptidoglycan hydrolase FlgJ OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=flgJ PE=3 SV=1
P58231 2.52e-19 20 330 14 300
Peptidoglycan hydrolase FlgJ OS=Escherichia coli O157:H7 OX=83334 GN=flgJ PE=3 SV=1
P15931 3.59e-19 185 330 153 303
Peptidoglycan hydrolase FlgJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=flgJ PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000045 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001054_00177.