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CAZyme Information: MGYG000001406.1_00592

You are here: Home > Sequence: MGYG000001406.1_00592

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kurthia massiliensis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_A; Planococcaceae; Kurthia; Kurthia massiliensis
CAZyme ID MGYG000001406.1_00592
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1014 MGYG000001406.1_1|CGC5 110744.48 9.8094
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001406.1 3201180 Isolate not provided not provided
Gene Location Start: 622919;  End: 625963  Strand: -

Full Sequence      Download help

MHKYWKSLAA  TCLATTIITA  PLATSLHAQA  VTQSTTATNV  SYMAEITSAK  TAIYQNAGDT60
KALATAGKAY  TNEIFYVRKQ  MIVNGTTYAQ  ITRGATDTTS  PIGWVKLNAL  KISTFSYPKN120
DATAKTLNGT  GIGYTRPGGL  ARNVLLTSLA  AYKGQAFQPL  STAKVGKETW  YFGVVSGINT180
WIKASSVDKT  AATPDVKAEE  VSYVASVKSA  KTPIYKRAGD  KKALTKAGTT  YTNEIFYVYA240
KKMIGDVAYY  ELKRKKEDAA  IGWVKEKSLK  LQTFKYVTNS  KKTFYVKNKG  KGYSRPAGGT300
RNVIYSTLKP  YKNDVFKSTA  KAKVGKATWY  IGKIGANSVW  VKSSSITSKA  PTVEKPTAPT360
TPDQPETIVI  IEQPVSLVAS  ITNKKAQVIQ  DLQAFDNKTT  VASANVKKTT  MITKQATVDD420
EIYYEFDSIG  WVKASDTKAQ  TYTNEQNIDE  VRTLKGTGRG  YAQAGSSAAR  EAVLSTLAAL480
ANTDFTVTKT  AEVDGKRWYY  GKTVNDVAIW  TAASNTTAKQ  KPKPAEPTYR  DVNLQATINS540
GNIAIYTDVT  NVDTSRNMSA  AEKVQSYTIA  KEAITADGDK  YYQLVYNGEA  IGWVETSAVT600
TFDVTNKKAT  LYLNGLGKAY  SEAGGKGTVV  YDTLTSYRTD  GFIPLTSQTI  SNIVYYKGII660
DNKTVWVAAT  SVSNPYYVEN  LRKVSNITQA  EMEAYLLKKK  GTAIKSNPLY  QAIPAFLNMQ720
EKYGINAQFM  LAHAILETGW  GQSEIFKYKN  NGFGYQAYDS  CAKTCALYFP  TMNDSVGYYA780
DAIYNKYLKE  GAIYNNGTTP  AGMNVKYATA  KNWSANISRL  MNDMKAYDAD  YYDKQTPSAI840
EPATISATYD  HIIPADKPQP  ATFRTIEATA  TVKATTKIYT  LPYATASREL  TTAKVGDTLN900
IVAYHEDVKD  PSATSRWFRI  DYKGQQAWVQ  SATLSIPALA  GTTKDNTVVL  SEAGTPTAKT960
IATLKKNVHV  AVLLDNKGQA  ITQKGTENVT  YISVKLFDSG  EIGWIDQSTL  RTFE1014

Enzyme Prediction      help

No EC number prediction in MGYG000001406.1_00592.

CAZyme Signature Domains help

Created with Snap50101152202253304354405456507557608659709760811861912963713825GH73
Family Start End Evalue family coverage
GH73 713 825 6.9e-20 0.9765625

CDD Domains      download full data without filtering help

Created with Snap50101152202253304354405456507557608659709760811861912963714787Glucosaminidase601828LytD713834FlgJ718760LYZ2532602GW_glycos_SH3
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01832 Glucosaminidase 1.67e-13 714 787 2 89
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG4193 LytD 7.96e-11 601 828 7 230
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
COG1705 FlgJ 1.17e-06 713 834 51 189
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
smart00047 LYZ2 3.64e-04 718 760 21 64
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
NF033202 GW_glycos_SH3 0.002 532 602 9 81
GW domain. The GW domain of Listeria belongs to the clan of SH3-like domains. A similar but broader model (PF13457) occurs in Pfam. The GW domain occurs as repeats on surface proteins of the cell-invading pathogenic bacterium Listeria monocytogenes, and is involved in binding to glycosaminoglycans. Members of this family include the GW-type internalin InlB and several paralogs.

CAZyme Hits      help

Created with Snap501011522022533043544054565075576086597097608118619129631971011AMA63834.1|GH731891014VEI05048.1|GH731901013QOV10422.1|GH731891013AMX00942.1|GH735161013AMX00941.1|GH73
Hit ID E-Value Query Start Query End Hit Start Hit End
AMA63834.1 8.82e-172 197 1011 38 846
VEI05048.1 5.84e-170 189 1014 30 863
QOV10422.1 8.45e-137 190 1013 25 853
AMX00942.1 3.83e-130 189 1013 33 735
AMX00941.1 1.82e-85 516 1013 19 519

PDB Hits      download full data without filtering help

Created with Snap501011522022533043544054565075576086597097608118619129635758184Q2W_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 9.99e-13 575 818 14 276
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Created with Snap50101152202253304354405456507557608659709760811861912963103834sp|Q99V41|ATL_STAAN103834sp|Q931U5|ATL_STAAM103834sp|A7X0T9|ATL_STAA1103834sp|P0C5Z8|ATL_STAAU103834sp|Q6GAG0|ATL_STAAS
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q99V41 3.61e-28 103 834 497 1234
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q931U5 3.61e-28 103 834 497 1234
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
A7X0T9 3.63e-28 103 834 504 1241
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=atl PE=3 SV=2
P0C5Z8 3.63e-28 103 834 504 1241
Bifunctional autolysin OS=Staphylococcus aureus OX=1280 GN=atl PE=1 SV=1
Q6GAG0 2.46e-27 103 834 499 1236
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000236 0.999105 0.000173 0.000192 0.000157 0.000137

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001406.1_00592.