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CAZyme Information: MGYG000003465_00146

You are here: Home > Sequence: MGYG000003465_00146

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-841 sp900544285
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; CAG-841; CAG-841 sp900544285
CAZyme ID MGYG000003465_00146
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
876 99217.08 5.2106
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003465 1993474 MAG Fiji Oceania
Gene Location Start: 53979;  End: 56609  Strand: +

Full Sequence      Download help

MSDISVYGLT  VNYLSVPVGV  DSLPRFSYKI  KSDVRGDRQV  SRRIRVFADA  EHTATVWDEG60
EQPTENQLFV  PYDGEPLVPV  RKYYYSVTVK  TAGGGEATAE  SSFVTGKLCE  RWTGKWIMAQ120
YVRRENDAFG  AVYLRKTFEI  TKPVLQAYLC  ICGLGYFESR  INGEKTGDDI  LSPAFTDFSK180
TDSYMTYDVK  PLLRQGKNAI  SVILGNGWYN  CFADDPWNTR  AATWRHWPKM  ICELKLTYSD240
GTEEKLVSDT  SWKGGKGPII  FNGIRNGEHY  DARLDLGDWE  SPDFDDSKWQ  NTKIVKSPGG300
ILRAMEMPPI  KIYRSFSPKK  IWKTKNGYAF  DFGQNMAGFC  EYVFRGARDT  EITIRHSDML360
FEDGELDMQM  GGMTRSHGFQ  TDKYIKKSDA  PEKWHPIFVY  HGFQYIEISG  IDYEPEKEDV420
TAYAVCTAVG  DTGRFSCSDE  LLNKVQQLCR  WSTISNMHSI  PTDCPHREKN  GWTGDTALSC480
EQMLINFGSQ  PFLAKWSRDM  RESQRPAGQI  PCVVPSTGWG  YYGLMGPDWS  SALITVPYNI540
YLYNNDPDIL  KINYDAIKRN  CDFMEGMTDD  LTLDYGTGDW  CPPFEGASLS  INMGAYRCPT600
EVSDTAFFYN  AAKTVVKIAR  IMGKDDDAEY  YADLASRIRK  VWREKFFDKS  TFTVKGDCQT660
ATGAMLYFGL  YEPDEYLPLV  KKLISQIEER  DWHLDFGVLG  NKFVMQSLGA  AGEGNVGQRM720
IAQRTFPGCQ  RWIDLGATTL  WECWNGTGSH  NHHMFSDLSA  FMYKYIGGIS  PDENEPGFVH780
TILRPAVDCG  MESASAEHES  MYGTVRCYWA  NRDGMLTVNI  SVPFGCRATL  YLPKHYARTL840
CSDGVPAEKQ  FGFLETEKEY  SIELESGEYS  LSAKAI876

Enzyme Prediction      help

No EC number prediction in MGYG000003465_00146.

CAZyme Signature Domains help

Created with Snap4387131175219262306350394438481525569613657700744788832325832GH78115299CBM67
Family Start End Evalue family coverage
GH78 325 832 6.8e-139 0.9880952380952381
CBM67 115 299 1e-34 0.9659090909090909

CDD Domains      download full data without filtering help

Created with Snap4387131175219262306350394438481525569613657700744788832431766Bac_rhamnosid6H142312Bac_rhamnosid_N328425Bac_rhamnosid768833Bac_rhamnosid_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 4.35e-95 431 766 2 340
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531 Bac_rhamnosid_N 4.26e-66 142 312 1 170
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592 Bac_rhamnosid 1.87e-25 328 425 8 101
Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390 Bac_rhamnosid_C 7.71e-16 768 833 1 64
Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Created with Snap43871311752192623063503944384815255696136577007447888329871QGQ94103.1|GH782833AHF16194.1|GH783845AYB33152.1|GH78134873QNN24933.1|CBM67|GH783863QNL52554.1|GH78
Hit ID E-Value Query Start Query End Hit Start Hit End
QGQ94103.1 1.27e-249 9 871 12 878
AHF16194.1 3.00e-206 2 833 19 862
AYB33152.1 4.30e-195 3 845 35 896
QNN24933.1 3.14e-178 134 873 355 1091
QNL52554.1 4.41e-178 3 863 23 887

PDB Hits      download full data without filtering help

Created with Snap438713117521926230635039443848152556961365770074478883258766I60_A18333W5M_A218336GSZ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6I60_A 2.87e-160 5 876 31 944
Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
3W5M_A 6.74e-105 1 833 1 995
CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A 2.00e-87 21 833 20 847
Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap438713117521926230635039443848152556961365770074478883211844sp|T2KPL4|PLH28_FORAG1833sp|Q82PP4|RHA78_STRAW17874sp|T2KNB2|PLH20_FORAG17837sp|P9WF03|RHA78_ALTSL264855sp|T2KM26|PLH36_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KPL4 5.01e-129 11 844 37 918
Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
Q82PP4 2.94e-104 1 833 1 995
Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2 7.89e-104 17 874 47 923
Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03 2.53e-96 17 837 43 883
Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KM26 1.09e-09 264 855 546 1159
Bifunctional sulfatase/alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22250 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000055 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003465_00146.