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CAZyme Information: MGYG000003808_00261
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pauljensenia culturomici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Pauljensenia; Pauljensenia culturomici | |||||||||||
| CAZyme ID | MGYG000003808_00261 | |||||||||||
| CAZy Family | CBM67 | |||||||||||
| CAZyme Description | Beta-hexosaminidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 15261; End: 20474 Strand: - | |||||||||||
Full Sequence Download help
| MLITPTAPRF EHHLEALGIP EAAPRLSWIV PDAPEGWEQI GYEVEARRPG SAAIETARVD | 60 |
| SGASVLVPWP FAPLRSRDSL EVRVRPLGSD ATPVEWSQWS RVEAGLLGAD EYPTSMIAPA | 120 |
| DDAWRAPLLR RAFTIPEDRA ILSACLRSTA RGLVRAEING MRASDEELAP GWTAYESRLI | 180 |
| VRTDDVTALV RPGVNALGLA LGDGWWRGRL GWSGEAALYG TTLSALVVLE VTLDDGSRID | 240 |
| VLPDDSWRSA PGPRRSADLY DGEEFDARLF DPAWSTPGFD DSAWEPARLV DVDPAILVGP | 300 |
| LAPPVRVVET RSPVEVFDSP YGGILLDFGQ NLVGRARIRL RTGEGTGVDA GHEVVLRHAE | 360 |
| VLENGALALE PLRTAKATDR YLCAGSGEEE WAPAFTFHGF RYLEVTGWPA DQRDALVGDD | 420 |
| PAIRAEVLST DMERTGRFDC SDPLLARFHE NVVQGMRSNF VSLPTDCPQR DERLGWTGDL | 480 |
| EVFAPTATFL FDASGILANW LADLAAEQTR YGGTPNVVPA IVTGYQGPMA AWGDAATVVP | 540 |
| WTAYEASGDL EFLRRSLPSM RAWVDEVAAA AGDSLIWSAG YQFGDWLDPD APAENPSKGK | 600 |
| CAPEIVATAY FARSARILAD AASVVDDVEV ATTYSDLADR VREAFIAEFV TPSGRLMSDA | 660 |
| QTAYALALAF DLLPESAREG AAARLADLVK SAGYRISTGF VGTPLVTGAL AANGYADVAY | 720 |
| RLLLQTEAPS WLYPVTKGAT TVWERWDSLL PDGTVNPSGM TSFNHYALGA VADWMHRTVA | 780 |
| GLAPAEPGWK RLQIAPIPPK RGLDSASASL LTPYGEASSS WRLEGGELHL DVRVPVGATA | 840 |
| RVHLPSGAIH EVGHGVHSFH EFFEVDAAER PHLDLDTPLG VLAEVDGALD LLAGAVEIAI | 900 |
| PGSAEHTGAG IAGQEGVTAR QISGMLPHSE RFLAGMERGF AALNAGDPVP VDLTVAGVRA | 960 |
| ARAAEEAERT ANATAADTAD ASESRNPVSG EAGRLGLTLE EKASLLSGED FWSTKAIESR | 1020 |
| GIPKLVLTDG PHGVRLQDGE SDHLGLNAAR PATCFPPAVA VGSSWNPALA AEIGRAVGEE | 1080 |
| GRSLGVDVVL GPGVNIKRSP LGGRNFEYYS EDPTLSGALG AAHVAGMQEV GVGASLKHFV | 1140 |
| ANDQETDRMR VSAEVDERTL REIYLASFER VVKEAKPATV MCAYNRLNGV FCSHNPWLLT | 1200 |
| TVLREEWGFE GLVVSDWGAV SDRVAGVAAG MDLEMPGGGG ANDAKIVEAV RNGSLSEDAV | 1260 |
| DASVARVLAL AAAKKEPNGP FDADAHHALA RRAAAECAVL LKNEDALPLS AGQRIAVIGA | 1320 |
| MAETPRYQGG GSSHINATRV DSPLDEIRAL ADARGSSVAR ALGYAIDEGA DARALLEEAV | 1380 |
| EAAAGSDVAI VFAGLPEKEE SEGFDRTTLD IPESQVALIR AVAAAAPKTV VVLMNGGVVS | 1440 |
| LEGFHDEVDA ILEGFLLGQG AGGAIADLLF GEANPSGHLA ESIPLRLEDT PSWANFPGEQ | 1500 |
| GRVRYGEGVF VGYRYYASAG APVRYPFGHG LSYTTFKTDG LEAEKTGEDS AVVRVRVTNT | 1560 |
| GGRAGAHVVQ VYVAAPSGPV RRPVRELRGF EKVALEPGES TTVEIVLDRR SFAYWDVERE | 1620 |
| DWVVPEGTAV VEVCANAHEV LASAPIDLAG DSFLQPLTMD STVGEWFGHP VVGPLLMEGM | 1680 |
| AAGMTEEQRA QADESADMLR MVESMPMRQF VGFLGGAMPP EALEGLMALS RGEDPTA | 1737 |
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH78 | 319 | 844 | 1.2e-170 | 0.9920634920634921 |
| GH3 | 1016 | 1236 | 2.8e-72 | 0.9861111111111112 |
| CBM67 | 125 | 290 | 1.2e-26 | 0.8693181818181818 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam17389 | Bac_rhamnosid6H | 4.85e-132 | 433 | 779 | 1 | 340 | Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria. |
| PRK15098 | PRK15098 | 7.40e-81 | 1053 | 1616 | 118 | 734 | beta-glucosidase BglX. |
| pfam01915 | Glyco_hydro_3_C | 5.01e-64 | 1298 | 1513 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| COG1472 | BglX | 1.75e-60 | 1009 | 1358 | 47 | 397 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| pfam08531 | Bac_rhamnosid_N | 6.99e-56 | 140 | 309 | 2 | 172 | Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AQX15642.1 | 0.0 | 1 | 1731 | 1 | 1677 |
| VEP40020.1 | 0.0 | 1 | 1731 | 1 | 1677 |
| SDS97270.1 | 0.0 | 1 | 1730 | 1 | 1697 |
| QFZ20630.1 | 0.0 | 997 | 1730 | 8 | 742 |
| QHC65671.1 | 0.0 | 997 | 1737 | 8 | 747 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6GSZ_A | 3.81e-226 | 10 | 860 | 9 | 864 | Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus] |
| 7MS2_A | 1.08e-213 | 997 | 1727 | 12 | 748 | ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2] |
| 5WAB_A | 1.27e-208 | 997 | 1707 | 12 | 721 | CrystalStructure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_B Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_C Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_D Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703] |
| 3W5M_A | 3.08e-163 | 113 | 859 | 291 | 1028 | CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893] |
| 2X40_A | 5.96e-117 | 997 | 1656 | 11 | 721 | Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with glycerol [Thermotoga neapolitana DSM 4359],2X41_A Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose [Thermotoga neapolitana DSM 4359] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P14002 | 8.31e-213 | 997 | 1727 | 12 | 748 | Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2 |
| F6C6C1 | 9.47e-206 | 997 | 1715 | 12 | 738 | Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium breve (strain ACS-071-V-Sch8b) OX=866777 GN=HMPREF9228_1477 PE=1 SV=1 |
| E7CY69 | 9.99e-205 | 997 | 1715 | 12 | 738 | Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium longum OX=216816 GN=apy PE=1 SV=1 |
| Q82PP4 | 1.20e-162 | 113 | 859 | 291 | 1028 | Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1 |
| T2KNB2 | 7.86e-150 | 17 | 846 | 48 | 880 | Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999943 | 0.000098 | 0.000006 | 0.000000 | 0.000000 | 0.000000 |