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CAZyme Information: MGYG000002787_00018

You are here: Home > Sequence: MGYG000002787_00018

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lactiplantibacillus pentosus
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactiplantibacillus; Lactiplantibacillus pentosus
CAZyme ID MGYG000002787_00018
CAZy Family GH85
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
948 MGYG000002787_1|CGC1 104850.52 10.2582
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002787 3358325 MAG United States North America
Gene Location Start: 26461;  End: 29307  Strand: +

Full Sequence      Download help

MRKRRQRQIA  STFALLIAAL  SLSACSSQQS  SGKVSYKQTA  EASLDKGMDN  QPEAPYWFPN60
QLLKWQFSKD  KQAKYNVATV  PLAKRIDKWQ  LPTVNKTQDP  KMKVVALSIM  NASTSGNAPR120
GINTFDANVF  SNWQYIDRLV  YWGGSAGEGL  IVPPTADVID  AAHKNGVPVL  GTVFFPQVVS180
GGKLKWLNDF  LKQDKDGHFP  MADKLVAVAK  AYGFDGWFIN  QETDPEVKSF  DSAASGKNSQ240
STTKSGLTKK  HAQLMQQLIK  EYKQKAGSKL  DLMWYDSMTK  DGKMDWQNAL  TKENQSYLVD300
ANMKPVADSM  FLNFWWTKKR  LASQDLLKKS  RDRAEKLGLN  PYNLFAGIDV  QADGTSTPVR360
WDLFANQHNV  PYTSLGLYAP  NWTYTSSETP  DEFQSKEETL  WVNSHSDPSR  SVPSKTSSQW420
PGVSTYAVEK  SAITKQPFIT  NFSLGNGYNY  FIKGRKVSLR  DWNNRSLQAI  NPTYRWMIDN480
PSGNDLKAAF  DYTDAYDGGN  DIQLSGQMRK  NKTSTIKLYT  TDIPFTTNTQ  VKVAAKATDK540
TQLDLVVTLK  DGRKKTIKGD  QALSSKWQTI  DYDVSGLAKK  TVKSISLSLT  TSKSDTSYRA600
QLGRLAITGK  PQASPTAVKS  VAIDNRVFDE  EGKYAGVNLS  WQAASTKHLD  HYEIYQRNQN660
SSRSFLGATD  TTNFYLNALE  RTGQQNETDL  MVVPVDIWNQ  RGPASKVTTL  KWPDNRKPKA720
AFTVDRTLAS  PGSTIKFTNT  SSKNATNFKW  QFTGAKQTSS  TAKNPTVTYA  KAGTYNVTLT780
AKNKDGQRSV  TMKKLITITP  KVKGALTVLS  KNAKTSASGY  TNSSEAPKMA  VDGKLSTKWC840
ATGKAPHTLT  LDLGHQATVS  AVKLAHAKAG  GESADMNTKA  WTIQVSTDGK  HFKDVARTYD900
NTKATSLNTF  AATTARYVRI  VVDKPTQVAD  TAVRIYEMDV  LGLNSPLK948

Enzyme Prediction      help

EC 3.2.1.96 3.2.1.113 3.2.1.-

CAZyme Signature Domains help

Created with Snap4794142189237284331379426474521568616663711758805853900109451GH85813938CBM32
Family Start End Evalue family coverage
GH85 109 451 1.1e-114 0.9968253968253968
CBM32 813 938 6.3e-25 0.9516129032258065

CDD Domains      download full data without filtering help

Created with Snap479414218923728433137942647452156861666371175880585390045610COG4724104480GH85_ENGase121447Glyco_hydro_85814934F5_F8_type_C714851COG3291
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4724 COG4724 0.0 45 610 22 552
Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism].
cd06547 GH85_ENGase 1.54e-142 104 480 1 337
Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins. The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment model.
pfam03644 Glyco_hydro_85 6.40e-115 121 447 1 291
Glycosyl hydrolase family 85. Family of endo-beta-N-acetylglucosaminidases. These enzymes work on a broad spectrum of substrates.
pfam00754 F5_F8_type_C 6.33e-17 814 934 1 124
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
COG3291 COG3291 5.51e-16 714 851 77 218
PKD repeat [Function unknown].

CAZyme Hits      help

Created with Snap47941421892372843313794264745215686166637117588058539001948BBM21557.1|CBM32|GH851948CCC16908.1|CBM32|GH851948ASG79670.1|CBM32|GH851948AUI77329.1|CBM32|GH851948AYG39025.1|CBM32|GH85
Hit ID E-Value Query Start Query End Hit Start Hit End
BBM21557.1 0.0 1 948 1 948
CCC16908.1 0.0 1 948 1 948
ASG79670.1 0.0 1 948 1 948
AUI77329.1 0.0 1 948 1 948
AYG39025.1 0.0 1 948 1 948

PDB Hits      download full data without filtering help

Created with Snap4794142189237284331379426474521568616663711758805853900506923FHQ_A506923FHA_A506922VTF_A617122W91_A617123GDB_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3FHQ_A 7.58e-134 50 692 4 599
ChainA, Endo-beta-N-acetylglucosaminidase [Glutamicibacter protophormiae],3FHQ_B Chain B, Endo-beta-N-acetylglucosaminidase [Glutamicibacter protophormiae],3FHQ_D Chain D, Endo-beta-N-acetylglucosaminidase [Glutamicibacter protophormiae],3FHQ_F Chain F, Endo-beta-N-acetylglucosaminidase [Glutamicibacter protophormiae]
3FHA_A 1.06e-133 50 692 4 599
ChainA, Endo-beta-N-acetylglucosaminidase [Glutamicibacter protophormiae],3FHA_B Chain B, Endo-beta-N-acetylglucosaminidase [Glutamicibacter protophormiae],3FHA_C Chain C, Endo-beta-N-acetylglucosaminidase [Glutamicibacter protophormiae],3FHA_D Chain D, Endo-beta-N-acetylglucosaminidase [Glutamicibacter protophormiae]
2VTF_A 1.24e-133 50 692 9 604
X-raycrystal structure of the Endo-beta-N-acetylglucosaminidase from Arthrobacter protophormiae E173Q mutant reveals a TIM barrel catalytic domain and two ancillary domains [Glutamicibacter protophormiae],2VTF_B X-ray crystal structure of the Endo-beta-N-acetylglucosaminidase from Arthrobacter protophormiae E173Q mutant reveals a TIM barrel catalytic domain and two ancillary domains [Glutamicibacter protophormiae]
2W91_A 1.89e-84 61 712 19 634
Structureof a Streptococcus pneumoniae family 85 glycoside hydrolase, Endo-D. [Streptococcus pneumoniae TIGR4],2W92_A Structure of a Streptococcus pneumoniae family 85 glycoside hydrolase, Endo-D, in complex with NAG-thiazoline. [Streptococcus pneumoniae TIGR4]
3GDB_A 4.37e-82 61 712 170 785
Crystalstructure of Spr0440 glycoside hydrolase domain, Endo-D from Streptococcus pneumoniae R6 [Streptococcus pneumoniae R6]

Swiss-Prot Hits      download full data without filtering help

Created with Snap479414218923728433137942647452156861666371175880585390060566sp|A1L251|ENASE_DANRE61506sp|P0C7A1|ENASE_CHICK130552sp|Q8BX80|ENASE_MOUSE132519sp|F4JZC2|ENAS1_ARATH61506sp|Q8NFI3|ENASE_HUMAN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1L251 1.66e-27 60 566 69 508
Cytosolic endo-beta-N-acetylglucosaminidase OS=Danio rerio OX=7955 GN=engase PE=2 SV=1
P0C7A1 5.01e-26 61 506 90 461
Cytosolic endo-beta-N-acetylglucosaminidase OS=Gallus gallus OX=9031 GN=ENGASE PE=1 SV=1
Q8BX80 2.52e-24 130 552 144 508
Cytosolic endo-beta-N-acetylglucosaminidase OS=Mus musculus OX=10090 GN=Engase PE=1 SV=1
F4JZC2 4.95e-24 132 519 94 422
Cytosolic endo-beta-N-acetylglucosaminidase 1 OS=Arabidopsis thaliana OX=3702 GN=ENGASE1 PE=1 SV=1
Q8NFI3 1.65e-22 61 506 92 469
Cytosolic endo-beta-N-acetylglucosaminidase OS=Homo sapiens OX=9606 GN=ENGASE PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000002 1.000023 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002787_00018.