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CAZyme Information: MGYG000002295_00130

You are here: Home > Sequence: MGYG000002295_00130

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_C callidus
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C callidus
CAZyme ID MGYG000002295_00130
CAZy Family GH9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1157 MGYG000002295_1|CGC2 122765.19 4.716
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002295 2957494 Isolate China Asia
Gene Location Start: 136395;  End: 139868  Strand: -

Full Sequence      Download help

MKKLGLGKRV  LACAASAATL  LTGTTALSGL  TTLGSMAASA  ASYDNYAKLL  QYSMYFYDGN60
MCGSDVGSAS  QFDWRDNCHG  SDEVDGGFHD  AGDHVKFGLP  AGYTASTLGW  GYYEFKDSYD120
ALGQTAHLQA  LTDRFCDFFK  ASTKLSGDTV  TSFCYQVGVG  QADHDVWCSP  ESQNDQSLRT180
AYWTSDDASD  IAAEYAAALA  VNYINFGNAE  DLKYAKALYN  YSIKTNKANC  PEAENFYRSY240
DYYDDQAWAA  GWLYLATKDS  TYSSFLDKFM  NDTNAGKSGQ  SGCKWGVYST  MCWNNVSLGA300
AILQSEITGD  AMDWAKVTTY  LNGKCTSEST  YYCESDWGSA  RYNTALQMAA  LATTKYSAKS360
GMDYSSWCKA  QMGMILGNNP  KNVNFVVGMD  SNSAKYPHHR  AASGYQSFDE  MKGRTDYSSN420
GHTLVGALVG  GPADSNFTYT  DSVNDYQANE  VALDYNAGLV  GAAAGLYSIY  KTGSVDSSIE480
GVSGSIVTTT  KATTITTKAT  TTTTNKPVTT  TTTQATTKRN  ITTTTIATAA  PSGGKTANIT540
TGTQVGTDGD  KQMYAEFAPN  GAKTATLYYK  VKTSDTNSSG  AFGTWTGSWV  QEDFEVTVGA600
NGECKVSYNI  PSNVGATVKA  MVFYPDASSV  EIEKVVLDES  STPVTTTVAT  SGNTSGGGKN660
ANITTGTQTG  TAGDKQLYAE  FAPNGAKTAT  LYYTISTKDT  NSSGAFGTWT  GSWEQTDFEV720
SVGANGQCKA  TYNIPSNVGQ  TVKAMVFYPD  ASSVKIDKVV  LDEGSSSNPT  TNATTTKHNP780
TTTATTAAAS  GDDKTANITT  GTQTGTAGDK  QLYAEFAPNG  AKSATLYYTI  STKDTNSSGA840
FGTWTGSWEQ  TDFEVNVGSN  GQCTADYVIP  SNVGQTVKAM  VFYPDASSVK  IDKVVLHYGN900
VTPGTTTAKP  SSGGKYTKDI  NKAIVYDELP  AGDKMLGWKW  SDLGVPAGEK  VTKVEINLST960
SKKQIGKWQG  AFGSSTSVAP  DYWTQSEDME  QTISGKTGSI  VWDVDSATSA  IIQTQYGGEL1020
KFGVWWIDCN  KFTIDSITVY  TDAYNGSGQI  TTTVSTTKAT  TNKTTASTTT  TTKKTTTATN1080
GPKPSVKASL  YGDVNLDGRV  DITDAVLLNK  KVAGVVILND  QQYANADCCT  DDGVGQADST1140
VLLQFLVSIV  RTLPAEG1157

Enzyme Prediction      help

EC 3.2.1.4 3.2.1.-

CAZyme Signature Domains help

Created with Snap571151732312893474044625205786366947528098679259831041109945464GH99291038CBM79
Family Start End Evalue family coverage
GH9 45 464 1.3e-95 0.9976076555023924
CBM79 929 1038 1.2e-41 0.9727272727272728

CDD Domains      download full data without filtering help

Created with Snap571151732312893474044625205786366947528098679259831041109948463Glyco_hydro_933466PLN0261350479PLN0234524466PLN001199301040DUF5620
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00759 Glyco_hydro_9 1.38e-81 48 463 1 374
Glycosyl hydrolase family 9.
PLN02613 PLN02613 2.74e-39 33 466 14 478
endoglucanase
PLN02345 PLN02345 6.07e-38 50 479 2 468
endoglucanase
PLN00119 PLN00119 4.56e-37 24 466 11 488
endoglucanase
pfam18522 DUF5620 2.78e-35 930 1040 1 119
Domain of unknown function (DUF5620). This is a domain of unknown function predicted to be a carbohydrate binding module.

CAZyme Hits      help

Created with Snap57115173231289347404462520578636694752809867925983104110998451157ERJ89368.1|CBM7944488CBL17554.1|GH9|3.2.1.41489CDE33541.1|CBM79|GH9441113EWM53237.1|CBM79|GH945476AFK82697.1|GH9
Hit ID E-Value Query Start Query End Hit Start Hit End
ERJ89368.1 9.66e-201 845 1157 1 313
CBL17554.1 4.57e-172 44 488 43 470
CDE33541.1 1.45e-171 1 489 1 482
EWM53237.1 6.00e-158 44 1113 41 829
AFK82697.1 1.08e-98 45 476 349 778

PDB Hits      download full data without filtering help

Created with Snap5711517323128934740446252057863669475280986792598310411099454752YIK_A454701IA6_A454702XFG_A454705GXX_A454705GY0_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2YIK_A 2.06e-90 45 475 39 521
ChainA, Endoglucanase [Acetivibrio thermocellus]
1IA6_A 1.13e-81 45 470 5 430
CrystalStructure Of The Cellulase Cel9m Of C. Cellulolyticum [Ruminiclostridium cellulolyticum],1IA7_A Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticium In Complex With Cellobiose [Ruminiclostridium cellulolyticum]
2XFG_A 3.34e-57 45 470 25 463
ChainA, ENDOGLUCANASE 1 [Acetivibrio thermocellus]
5GXX_A 3.65e-56 45 470 6 429
ChainA, Glucanase [Acetivibrio thermocellus],5GXX_B Chain B, Glucanase [Acetivibrio thermocellus],5GXY_A Chain A, Glucanase [Acetivibrio thermocellus],5GXY_B Chain B, Glucanase [Acetivibrio thermocellus],5GXZ_A Chain A, Glucanase [Acetivibrio thermocellus],5GXZ_B Chain B, Glucanase [Acetivibrio thermocellus]
5GY0_A 2.21e-55 45 470 6 429
ChainA, Glucanase [Acetivibrio thermocellus],5GY0_B Chain B, Glucanase [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap571151732312893474044625205786366947528098679259831041109945482sp|Q02934|GUNI_ACET245467sp|P37700|GUNG_RUMCH45470sp|P22534|GUNA_CALSA45470sp|P26221|GUN4_THEFU45473sp|Q5YLG1|GUNA_BACPU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q02934 3.14e-54 45 482 77 526
Endoglucanase 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celI PE=1 SV=2
P37700 7.76e-53 45 467 40 472
Endoglucanase G OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=celCCG PE=1 SV=2
P22534 6.76e-48 45 470 27 463
Endoglucanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celA PE=3 SV=2
P26221 2.76e-47 45 470 51 490
Endoglucanase E-4 OS=Thermobifida fusca OX=2021 GN=celD PE=1 SV=2
Q5YLG1 1.88e-46 45 473 48 489
Endoglucanase A OS=Bacillus pumilus OX=1408 GN=eglA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004059 0.989158 0.000682 0.005497 0.000333 0.000253

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002295_00130.