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CAZyme Information: MGYG000004347_00003

You are here: Home > Sequence: MGYG000004347_00003

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA5884 sp900551505
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UBA5884; UBA5884 sp900551505
CAZyme ID MGYG000004347_00003
CAZy Family CBM4
CAZyme Description Cellulose 1,4-beta-cellobiosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
896 99290.13 4.2966
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004347 1790191 MAG Israel Asia
Gene Location Start: 3142;  End: 5832  Strand: +

Full Sequence      Download help

MLKKFFKTVI  ACTASLLIAV  APLPAQYLEV  SADQLLGQTD  FDDGVGLPWH  TCETLPADLD60
FEITDGVYRI  TINNPGGASR  GGEDRWDCQF  RHRGLAVQQG  HTYKVKYTIK  ASKDCTYYTK120
IGDMSEPYFE  DWHGEPDSSQ  YNNYWDLKPL  KANQAVTVEG  SFTATRTSET  VEWAFHIGGD180
SVPEGTVFEF  DNMSLTDDQY  TAPEKEQEWQ  RADILTNQLG  YFADREKKAT  LVSDDTNSLD240
FQLIDSSGNE  VYSGKTSPKG  YDEDSGDNVH  IIDFSDFSDE  GTYKLVCENS  ESREFQIGSD300
LYNNMLYDSL  KYFYHNRSGI  DITMPYCEEQ  QYARSAGHNP  DNVQTEIVNT  GSSWDYNDSY360
SLDVTGGWYD  AGDHGKYVVN  GGISVWTMQN  QYERSLYVDG  ADNDSVKDGY  MNIPESNNGY420
PDILDEARYE  MEFMLKMIVP  DGKELAGMVH  HKVHDVTWTG  LAVAPADDPK  ERIIKPPTTT480
ATLNVSATAA  QAYRVWKDLD  SEFAEKCLEA  AKKTYEAAKA  HPDRFAPLDE  AIGGGAYGDD540
NADDEFYWAA  CELYLATGEQ  QYYDDMKNSE  YFLTMPTKLS  GGENVDTVAS  FDWGSTAGLG600
TLSLALVKGN  LDKKDIEKVT  ENITDAGDFY  LNLEDSQGYG  VPIKQSTVNK  FIDLQGYPWG660
SNSMVVNSAI  VMAYAYDLSG  DGKYYDGVTE  AMDYIMGRNP  VDYSYVTGYG  THSATYPHHR720
FFANQVDSNF  PLAPAGILVG  GPNSGLQDPW  VKGSGWKLGE  KAPQLCYMDN  IESWSTNECT780
INWNSPLAWV  TGFLTKNPVS  KSANTVSDSS  NSSSNSVSSS  SASNSSKNSA  SESSDSKNKN840
SSSTTQTNKE  NNKNNATQTG  EIIKWLAILA  IVISSQVFVF  KIIKLFKGDN  NNKKEG896

Enzyme Prediction      help

EC 3.2.1.4 3.2.1.78

CAZyme Signature Domains help

Created with Snap4489134179224268313358403448492537582627672716761806851302790GH935178CBM4
Family Start End Evalue family coverage
GH9 302 790 9.3e-123 0.9904306220095693
CBM4 35 178 1.1e-29 0.9841269841269841

CDD Domains      download full data without filtering help

Created with Snap4489134179224268313358403448492537582627672716761806851304790Glyco_hydro_9214297E_set_Cellulase_N212292CelD_N40181CBM_4_9361744PLN02909
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00759 Glyco_hydro_9 8.90e-97 304 790 1 373
Glycosyl hydrolase family 9.
cd02850 E_set_Cellulase_N 5.91e-29 214 297 2 86
N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
pfam02927 CelD_N 6.38e-27 212 292 1 83
Cellulase N-terminal ig-like domain.
pfam02018 CBM_4_9 2.00e-14 40 181 8 134
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
PLN02909 PLN02909 2.36e-13 361 744 75 427
Endoglucanase

CAZyme Hits      help

Created with Snap448913417922426831335840344849253758262767271676180685111793ADU21576.1|CBM4|GH929794QTL97152.1|CBM4|GH929811AGF55629.1|CBM4|GH930794CUH93326.1|CBM4|GH931794QNU67291.1|CBM4|GH9
Hit ID E-Value Query Start Query End Hit Start Hit End
ADU21576.1 1.55e-306 11 793 12 798
QTL97152.1 6.59e-300 29 794 34 802
AGF55629.1 2.78e-282 29 811 30 818
CUH93326.1 4.85e-281 30 794 41 790
QNU67291.1 5.09e-278 31 794 38 788

PDB Hits      download full data without filtering help

Created with Snap44891341792242683133584034484925375826276727167618068512137941UT9_A2137941RQ5_A2147876DHT_A2147974CJ0_A2147971CLC_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1UT9_A 1.41e-188 213 794 6 604
ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus]
1RQ5_A 1.64e-187 213 794 6 604
ChainA, Cellobiohydrolase [Acetivibrio thermocellus]
6DHT_A 8.93e-68 214 787 18 557
Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483]
4CJ0_A 7.42e-63 214 797 30 551
ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus]
1CLC_A 9.66e-63 214 797 44 565
ChainA, ENDOGLUCANASE CELD; EC: 3.2.1.4 [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap448913417922426831335840344849253758262767271676180685133794sp|A3DCH1|CELK_ACET233794sp|P0C2S1|CELK_ACETH2793sp|Q05156|GUN1_STRRE217793sp|P10476|GUNA_CELJU34794sp|P14090|GUNC_CELFA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DCH1 6.83e-230 33 794 40 811
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1
P0C2S1 6.83e-230 33 794 40 811
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1
Q05156 5.90e-164 2 793 1 741
Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1
P10476 5.83e-151 217 793 40 597
Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2
P14090 4.75e-149 34 794 183 907
Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.104059 0.886848 0.007278 0.000775 0.000432 0.000568

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004347_00003.