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CAZyme Information: MGYG000001671_00309

You are here: Home > Sequence: MGYG000001671_00309

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species HGM11507 sp900761005
Lineage Bacteria; Firmicutes_A; Clostridia; UMGS1840; UMGS1840; HGM11507; HGM11507 sp900761005
CAZyme ID MGYG000001671_00309
CAZy Family GT84
CAZyme Description Cyclic beta-(1,2)-glucan synthase NdvB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2679 309085.65 7.0771
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001671 3303038 MAG United States North America
Gene Location Start: 19809;  End: 27848  Strand: +

Full Sequence      Download help

MKKQQVLTEQ  MIRFAKESRQ  IAVFDDGKIA  QDLITSLKRD  FRKITELYQR  ISKIEILPGF60
SEWLLDNYYM  LVELYQRIIH  EVDEKWLAQL  PRFQSGIYRD  KVRLYGLLKE  FFLASTPPFS120
MEELVEYLNL  YQEEKKMKNI  EIWAIGSVGQ  MVLFSMLKSI  CLKAEELIHM  NEEAKKSRKI180
SGKENFSFQY  YFCQKLPESI  RRKQKNYEMI  QQKQQALEGF  LEGLTAKVFT  NLRQIQGLDF240
PELFEKLSYT  EQLFLKDKTY  QKMDFSSKNY  YRYQLAVLAE  KNHMPEEDVA  NHVMELSSQE300
SEERKRHIGY  YLLCEPLGST  NVKKKNRMLY  TAGNITFILL  FKVALFWILY  ALGFRELFLF360
CLIGVVSFIP  VTDISINLTN  YLFLKCVKAT  MIPKIELKRE  IPDSAKTSVV  ISSLILSPEN420
IDSLTKKIEG  YYLANRAEHI  YFGILGDLKD  APSEHLPNDH  ENVNYLKAKI  EELNRKYKDM480
PFFALTRSRT  YSSTQGNYIG  WERKRGAITE  FARYLRGEKK  HSFFYRFGNT  EDILSSKYIV540
TLDSDTQPSI  GSVKELIGAM  IHPLNRAEID  REKHRVTKGY  GIIQPKVNIS  LSSAYQSEFS600
KIFAGVGGFD  PYVNANSDVY  QDNFAEGIFT  GKGILDVDVF  VDLVDDVIPD  NRVLSHDLLE660
GSIARTALAG  DIEFVDGFPA  KVSSYFARYH  RWVRGDWQLL  YFLKSRLTLR  SKEKVKNPLS720
LLSRWKMIDN  LRRSLVAPFV  FIMLLCAAFL  PFAWSIVLVI  LSLLTLGLSL  CTAVCDNVLY780
RDFKFFYEKS  YTRAIYGLKS  VFLQFLCLLS  FLPYHAYISI  DAAIRTVFRL  LFTGKHMLEW840
TTAEEAERNM  KDDQFAYMKR  MWFSIASGLF  FILYHTNFPL  FLIGVSFFLS  PGIAYLISRP900
CKEKKEKLDT  ADNVFLRRCA  FRIWNFFDDL  VTDEENFLPP  DNLQNSPPNG  VAHRTSPTNI960
GLYLLSVLSA  RDFGYLTTDA  MCEKIAGTLN  TIDKLETCNG  HLFNWYDTRT  LEVLRPKYVS1020
TVDSGNYIAC  LIALKEGLRE  YAETENFNFS  NIQGLKDAIL  EEKAEYRELL  DDVTDKAEMF1080
QKLNLHQDEF  INNRTIQKML  SMFREEKSFD  IGDLLQRITR  IIESTSFSFL  YNDRKELFSI1140
GYNAEEKKLT  PSYYDLLASE  ARQTSYIAVA  KGEVGKRHWR  RLGRSMAQFD  HHSGLVSWTG1200
TMFEYLMPLL  LQKDYRGSLL  DETYQFVVDS  QIEYAENKNV  PWGISESGFY  SFDIDLNYQY1260
KAFGIPDNGL  KRGLKEDTVI  SPYSTFLAMM  VRPRRAVTNL  KLLKEMGAFQ  KYGYIEALDF1320
TETRVQGEKA  FEVVDSYMAH  HQGMSFLALN  NVLNGDILKD  RFMRDPSMYS  AQELLEEKLA1380
TKVVITKEEK  ERIEPLRPID  RKSEECIRGY  HYENCYPPRM  HILSNGTLSY  VTTETGLSYL1440
KCRDIYVNRF  RKNLYGNQYG  AFIYIRDINE  NLSYSATYAP  SKQIPETYKS  VFYPEKAEYR1500
RRNAELTTTL  DITLSTENNA  LLQTVTLFNH  SGREKEVEVT  SYLELILSSI  DQDLAHPAFN1560
SLFIRTFEKE  GVLFAVRRPR  GEKEKNLYAS  HFAVTDFIPE  GDISYETDRA  KFMGRKHTTQ1620
DPHAVREPFS  NTTGAVLDPI  FSLRVPCKLA  AKEQKCICFI  TIIEDSMARL  ERNLESYSSF1680
DSVKRTFELA  HSRGRQNVIT  KDTKEQETYL  NLLGHLLYES  PNKLNYKNQI  AQNTLGVSAL1740
WKFGISGDLP  ILTGLILKEE  DFAYAQQLIK  CHEFLTVKGL  KFDLLLLTKD  DDSYMAPVFR1800
QTKEILEKTT  FSGLIDCPGG  VFIRSLEAMT  EADRNAVLAK  SSFVVDPRAG  TIVSQVQSAF1860
LQLDNTIYKI  SEEKEQSAPY  TERLRFYNGY  GGFNDKNEYV  ILLADGRETP  LPWCNVIANP1920
RFGCVATESG  GGYTWAENSR  ENKLTQWSND  PLIDSVSEAV  YVKEGNHIFT  ITPYPVRKHQ1980
NYRITHGFGY  TVYHSFHREI  NCEQTVFVPQ  SKPMKITKLR  LKNESSCLKK  LSLFYYVKPV2040
MGVFENEQAL  IKRENNVIYA  QNRMNEEFKD  RQLFVTSTEM  ITGVEKEFLS  FMGNPKSEIP2100
SGVINGLAQS  EPSEYALHPC  IAIEISVSIK  PHETRELAFV  LGQGSNIAET  SSCLKQLQGI2160
YEVNEMLKKT  KDFWNKKLSV  IQIHTPDESM  NRMLNGWMLY  QSLSCRIWGR  SGFYQAGGAY2220
GFRDQLQDCM  SMLFADPKIA  LLQILKHSTH  QFLEGDVQHW  WHPKLHQDAG  DKGVRTRFSD2280
DLLWLPYVTW  EYIQKTGDKE  ILDIKTSFLE  EAVLAENEEE  RYGLPRISKE  KASLFEHMKR2340
AVDRSMKRGR  NGLPLIGTGD  WNDGFSAVGK  EGEGESVWLG  WFLCDVLEKT  AEMCEMKGEA2400
ECAERYRTHA  RHIAKAANQN  AWDGEWYIRA  FFDNGMPLGS  KENDEAKIDA  IAQAWAIISG2460
KGEKEKAQQA  LRSVKQYLVD  EKHGLIKLLT  PAFDKSKNNP  GYIKSYIPGV  RENGGQYTHA2520
AVWVCMACAI  QKQKDDAYRL  YSMLNPVRHS  DSQEQAELYK  VEPYVISADV  YSNENQTGRG2580
GWSWYTGAAG  WYYRVGMEYI  LGFRKNGDYL  YFEPCIPSEW  KAYQINYNYF  DTLYQINVSC2640
PNGGGISVKE  IYENGKHLIE  KKVPLCNDKQ  LHKISVVLE2679

Enzyme Prediction      help

EC 2.4.1.-

CAZyme Signature Domains help

Created with Snap13326740153566980393710711205133914731607174118752009214322772411254516052676GH9411521366GT84
Family Start End Evalue family coverage
GH94 1605 2676 0 0.9980694980694981
GT84 1152 1366 1.2e-96 0.9953488372093023

CDD Domains      download full data without filtering help

Created with Snap13326740153566980393710711205133914731607174118752009214322772411254516052678COG345921732604Glyco_hydro_3613581689GH94N_ChvB_NdvB_2_like18842149GH94N_ChvB_NdvB_1_like19102142Glyco_transf_36
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3459 COG3459 0.0 1605 2678 2 1053
Cellobiose phosphorylase [Carbohydrate transport and metabolism].
pfam17167 Glyco_hydro_36 1.31e-133 2173 2604 1 425
Glycosyl hydrolase 36 superfamily, catalytic domain. This is the catalytic region of the superfamily of enzymes referred to as GH36. UniProtKB:Q76IQ9 is a chitobiose phosphorylase that catalyzes the reversible phosphorolysis of chitobiose into alpha-GlcNAc-1-phosphate and GlcNAc with inversion of the anomeric configuration. The full-length enzyme comprises a beta sandwich domain and an (alpha/alpha)(6) barrel domain. The alpha-helical barrel component of the domain, this family, is the catalytic region.
cd11753 GH94N_ChvB_NdvB_2_like 2.86e-100 1358 1689 1 336
Second GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains. The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cyclic beta 1-2 glucan synthetase (EC:2.4.1.20) or ChvB (encoded by the chromosomal chvB virulence gene). This second of two tandemly repeated GH94-N-terminal-like domains has not been characterized functionally. Some beta 1-2 glucan synthetases are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants.
cd11756 GH94N_ChvB_NdvB_1_like 1.09e-94 1884 2149 2 275
First GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains. The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cyclic beta 1-2 glucan synthetase (EC:2.4.1.20) or ChvB (encoded by the chromosomal chvB virulence gene). This first of two tandemly repeated GH94-N-terminal-like domains has not been characterized functionally. Some beta 1-2 glucan synthetases are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants.
pfam06165 Glyco_transf_36 2.55e-68 1910 2142 1 247
Glycosyltransferase family 36. The glycosyltransferase family 36 includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-). Many members of this family contain two copies of this domain.

CAZyme Hits      help

Created with Snap13326740153566980393710711205133914731607174118752009214322772411254592678QEK11488.1|GH0|GH94|GT84272678QXM05338.1|GH94|GT84342678AEV69563.1|GH0|GH94|GT8492678ABR49663.1|GH0|GH94|GT8482678ABY92281.1|GH0|GH94|GT84
Hit ID E-Value Query Start Query End Hit Start Hit End
QEK11488.1 0.0 9 2678 29 2845
QXM05338.1 0.0 27 2678 45 2845
AEV69563.1 0.0 34 2678 68 2919
ABR49663.1 0.0 9 2678 24 2843
ABY92281.1 0.0 8 2678 41 2886

PDB Hits      download full data without filtering help

Created with Snap133267401535669803937107112051339147316071741187520092143227724112545189026783QDE_A189026393S4C_A189026393RRS_A189026641V7V_A189026452CQS_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3QDE_A 8.20e-95 1890 2678 3 810
ChainA, Cellobiose phosphorylase [Acetivibrio thermocellus],3QDE_B Chain B, Cellobiose phosphorylase [Acetivibrio thermocellus]
3S4C_A 4.51e-78 1890 2639 3 784
Lactosephosphorylase in complex with sulfate [Cellulomonas uda],3S4D_A Lactose phosphorylase in a ternary complex with cellobiose and sulfate [Cellulomonas uda]
3RRS_A 3.62e-77 1890 2639 3 784
Crystalstructure analysis of cellobiose phosphorylase from Cellulomonas uda [Cellulomonas uda],3RRS_B Crystal structure analysis of cellobiose phosphorylase from Cellulomonas uda [Cellulomonas uda],3RSY_A Cellobiose phosphorylase from Cellulomonas uda in complex with sulfate and glycerol [Cellulomonas uda],3RSY_B Cellobiose phosphorylase from Cellulomonas uda in complex with sulfate and glycerol [Cellulomonas uda],3S4A_A Cellobiose phosphorylase from Cellulomonas uda in complex with cellobiose [Cellulomonas uda],3S4A_B Cellobiose phosphorylase from Cellulomonas uda in complex with cellobiose [Cellulomonas uda],3S4B_A Cellobiose phosphorylase from Cellulomonas uda in complex with glucose [Cellulomonas uda],3S4B_B Cellobiose phosphorylase from Cellulomonas uda in complex with glucose [Cellulomonas uda]
1V7V_A 4.96e-77 1890 2664 3 786
Crystalstructure of Vibrio proteolyticus chitobiose phosphorylase [Vibrio proteolyticus],1V7W_A Crystal structure of Vibrio proteolyticus chitobiose phosphorylase in complex with GlcNAc [Vibrio proteolyticus],1V7X_A Crystal structure of Vibrio proteolyticus chitobiose phosphorylase in complex with GlcNAc and sulfate [Vibrio proteolyticus]
2CQS_A 9.67e-72 1890 2645 23 810
CrystalStructure of Cellvibrio gilvus Cellobiose Phosphorylase Crystallized from Ammonium Sulfate [Cellulomonas gilvus],2CQS_B Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Crystallized from Ammonium Sulfate [Cellulomonas gilvus],2CQT_A Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Crystallized from Sodium/Potassium Phosphate [Cellulomonas gilvus],2CQT_B Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Crystallized from Sodium/Potassium Phosphate [Cellulomonas gilvus],3QFY_A Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Sulfate and Isofagomine [Cellulomonas gilvus],3QFY_B Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Sulfate and Isofagomine [Cellulomonas gilvus],3QFZ_A Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Sulfate and 1-Deoxynojirimycin [Cellulomonas gilvus],3QFZ_B Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Sulfate and 1-Deoxynojirimycin [Cellulomonas gilvus],3QG0_A Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Phosphate and 1-Deoxynojirimycin [Cellulomonas gilvus],3QG0_B Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Phosphate and 1-Deoxynojirimycin [Cellulomonas gilvus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap133267401535669803937107112051339147316071741187520092143227724112545612651sp|P20471|NDVB_RHIME18902678sp|B9K7M6|CBPA_THENN18902678sp|Q76IQ9|CHBP_VIBPR18902656sp|Q9F8X1|CHBP_VIBFU19602649sp|Q7S0S2|CELAP_NEUCR
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P20471 0.0 61 2651 90 2818
Cyclic beta-(1,2)-glucan synthase NdvB OS=Rhizobium meliloti (strain 1021) OX=266834 GN=ndvB PE=1 SV=2
B9K7M6 1.42e-91 1890 2678 3 812
Cellobiose phosphorylase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E) OX=309803 GN=cbpA PE=1 SV=1
Q76IQ9 1.80e-76 1890 2678 3 800
N,N'-diacetylchitobiose phosphorylase OS=Vibrio proteolyticus OX=671 GN=chbP PE=1 SV=1
Q9F8X1 1.42e-75 1890 2656 3 779
N,N'-diacetylchitobiose phosphorylase OS=Vibrio furnissii OX=29494 GN=chbP PE=1 SV=1
Q7S0S2 1.26e-43 1960 2649 87 764
Cellobionic acid phosphorylase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=NCU09425 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
330 352
362 384
735 757
801 820
861 883