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CAZyme Information: MGYG000004046_00468

You are here: Home > Sequence: MGYG000004046_00468

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Limosilactobacillus vaginalis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus; Limosilactobacillus vaginalis
CAZyme ID MGYG000004046_00468
CAZy Family GT111
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
253 MGYG000004046_6|CGC1 30094.32 6.3844
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004046 1731903 MAG United Kingdom Europe
Gene Location Start: 48999;  End: 49760  Strand: +

Full Sequence      Download help

MKTKVLVAAH  KNYEMPKDPL  YLPVFVGKEI  HPDVNHTFQG  DNTGDNISAK  NPYYNELTAI60
YWGWKNLDVD  AMGLVHYRRY  LSLNHQKSLD  EVLSTEQVAD  LLKDYDIILP  SKQRYYIETN120
ESHYLHAHEH  EPFEVMRQVI  HQDYPDYAPA  FEKVMKRTWA  HMFNMLIMKR  KPLDEYCTWM180
FDVLGEVESR  IDISNYSTYE  QRVYGFLSEL  LLDVWLEVHP  EYSTVEVKYV  FMEHTNWFKK240
GGKFVLRKIT  GHA253

Enzyme Prediction      help

No EC number prediction in MGYG000004046_00468.

CAZyme Signature Domains help

Created with Snap122537506375881011131261391511641771892022152272405217GT111
Family Start End Evalue family coverage
GT111 5 217 1.4e-85 0.9861751152073732

CDD Domains      download full data without filtering help

Created with Snap122537506375881011131261391511641771892022152272404219DUF4422
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14393 DUF4422 7.52e-128 4 219 1 219
Domain of unknown function (DUF4422). This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 255 and 371 amino acids in length.

CAZyme Hits      help

Created with Snap122537506375881011131261391511641771892022152272401253QFS34619.1|GT1111253QIX59160.1|GT1111253QEY01483.1|GT1111253QLE77802.1|GT1111253AGL89444.1|GT111
Hit ID E-Value Query Start Query End Hit Start Hit End
QFS34619.1 2.83e-190 1 253 1 253
QIX59160.1 2.01e-165 1 253 1 253
QEY01483.1 5.75e-165 1 253 1 253
QLE77802.1 5.75e-165 1 253 1 253
AGL89444.1 5.75e-165 1 253 1 253

PDB Hits      download full data without filtering help

Created with Snap1225375063758810111312613915116417718920221522724042286U4B_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6U4B_A 2.67e-28 4 228 30 278
ChainA, WbbM protein [Klebsiella pneumoniae]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004046_00468.