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CAZyme Information: MGYG000003137_00392

You are here: Home > Sequence: MGYG000003137_00392

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bradyrhizobium sp000015165
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Bradyrhizobium; Bradyrhizobium sp000015165
CAZyme ID MGYG000003137_00392
CAZy Family GT14
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
307 MGYG000003137_1|CGC1 35707.77 9.1634
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003137 8388709 MAG United States North America
Gene Location Start: 453213;  End: 454136  Strand: -

Full Sequence      Download help

MTGRPDLQGD  ATALTRPGGA  TRLAFFILCH  KAPHQVIRLI  ERLRDDRNVF  VVHVDKRAAV60
EVYQELRALS  ERLPSQVFLC  AERHRCYWGR  FGIVAATLSC  MREAITRTLA  FDRAFLLSGQ120
DYPIKSQDEI  RARLDAHPNA  EFIESFAADA  PNRWTAAQGE  HNALNRVLYW  TLSFRSRHIQ180
IKWRRRFPLG  FRPHGGSMWW  CLTSDCVAYV  DSFVRQNPAY  VRYFKTVFIP  DESFFQSLLS240
NSPFRDRIVS  DDLRYADWER  PNPLYPRTLD  IDDAERLRAS  PKLFARKFDE  RSLALLDLID300
REIALSP307

Enzyme Prediction      help

No EC number prediction in MGYG000003137_00392.

CAZyme Signature Domains help

Created with Snap15304661769210712213815316818419921423024526027629123271GT14
Family Start End Evalue family coverage
GT14 23 271 5.2e-67 0.98

CDD Domains      download full data without filtering help

Created with Snap15304661769210712213815316818419921423024526027629123278Branch38303PLN03183
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02485 Branch 8.99e-28 23 278 1 250
Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme. I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. This is a fmmily of glycosyl-transferases that are Type II membrane proteins that are found in the endoplasmic reticulum (ER) and Golgi apparatus.
PLN03183 PLN03183 7.05e-18 38 303 96 364
acetylglucosaminyltransferase family protein; Provisional

CAZyme Hits      help

Created with Snap1530466176921071221381531681841992142302452602762911307ABQ33257.1|GT1422303QLE58466.1|GT1422303AUT02014.1|GT149300AYO77161.1|GT1422300QNG48427.1|GT14
Hit ID E-Value Query Start Query End Hit Start Hit End
ABQ33257.1 2.59e-229 1 307 1 307
QLE58466.1 9.61e-91 22 303 2 284
AUT02014.1 4.09e-90 22 303 2 282
AYO77161.1 4.70e-78 9 300 14 301
QNG48427.1 1.84e-77 22 300 2 278

PDB Hits      download full data without filtering help

Created with Snap153046617692107122138153168184199214230245260276291172896EJ7_A172896EJ8_A141453OTK_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6EJ7_A 1.02e-21 17 289 114 393
HumanXylosyltransferase 1 in complex with UDP-xylose and peptide QEEEGAGGGQGG [Homo sapiens],6EJ9_A Human Xylosyltransferase 1 in complex with peptide QEPEGSGGGQGG [Homo sapiens],6EJA_A Human Xylosyltransferase 1 in complex with peptide QEEEYSGGGQGG [Homo sapiens],6EJB_A Human Xylosyltransferase 1 in complex with peptide QEEEGSAGGQGG [Homo sapiens],6EJC_A Human Xylosyltransferase 1 in complex with peptide QEEEGSGVGQGG [Homo sapiens],6EJD_A Human Xylosyltransferase 1 in complex with peptide QEEEGSGGPQGG [Homo sapiens],6EJE_A Human Xylosyltransferase 1 in complex with peptide PAAEGSGEQDFT [Homo sapiens],6FOA_A Human Xylosyltransferase 1 apo structure [Homo sapiens]
6EJ8_A 1.02e-21 17 289 118 397
HumanXylosyltransferase 1 in complex with peptide QEEEGSGGGQGG [Homo sapiens]
3OTK_A 6.54e-06 14 145 77 207
Structureand mechanisim of core 2 beta1,6-n-acetylglucosaminyltransferase: a Metal-ion independent gt-a glycosyltransferase [Mus musculus],3OTK_B Structure and mechanisim of core 2 beta1,6-n-acetylglucosaminyltransferase: a Metal-ion independent gt-a glycosyltransferase [Mus musculus],3OTK_C Structure and mechanisim of core 2 beta1,6-n-acetylglucosaminyltransferase: a Metal-ion independent gt-a glycosyltransferase [Mus musculus],3OTK_D Structure and mechanisim of core 2 beta1,6-n-acetylglucosaminyltransferase: a Metal-ion independent gt-a glycosyltransferase [Mus musculus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap1530466176921071221381531681841992142302452602762915300sp|Q9EPI0|XYLT2_RAT2289sp|Q5QQ53|XYLT_DROPS5300sp|Q5QQ50|XYLT2_CANLF1300sp|Q5QQ51|XYLT2_PANTR17289sp|Q5QQ57|XYLT1_PANTR
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9EPI0 5.31e-22 5 300 214 519
Xylosyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Xylt2 PE=2 SV=1
Q5QQ53 5.34e-22 2 289 231 529
Xylosyltransferase oxt OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=oxt PE=2 SV=1
Q5QQ50 2.39e-21 5 300 214 519
Xylosyltransferase 2 OS=Canis lupus familiaris OX=9615 GN=XYLT2 PE=2 SV=1
Q5QQ51 5.88e-21 1 300 208 519
Xylosyltransferase 2 OS=Pan troglodytes OX=9598 GN=XYLT2 PE=2 SV=1
Q5QQ57 6.05e-21 17 289 308 587
Xylosyltransferase 1 OS=Pan troglodytes OX=9598 GN=XYLT1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003137_00392.