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CAZyme Information: MGYG000000824_00060

You are here: Home > Sequence: MGYG000000824_00060

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900552315
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900552315
CAZyme ID MGYG000000824_00060
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
412 MGYG000000824_1|CGC1 46297.08 10.3402
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000824 2120674 MAG China Asia
Gene Location Start: 58388;  End: 59626  Strand: -

Full Sequence      Download help

MKYMVIAGEV  SGDLHASRLM  TGIRSIDKDA  EFRFFGGEKM  AAAAGCEPVV  HCDKMNVMGF60
SEVLRHLPEL  IGHLRHAKRL  MQIWRPDVLV  LVDYPSFNLK  LAKAAHRLGI  PVHYFISPKI120
WAWKEWRVKA  IKKYVDAMYS  ILPFEVDFYR  KHGYEVTYVG  NPSVQEMDEV  MGHITPLRHF180
LQRHGIEDQR  PVIAIVPGSR  RGEVKNNLPL  MIEAAKRFPD  YQIIVGGASS  IPSRFYRETA240
QYPGLNVVFG  ATHTLMKHAR  AALVTSGTAT  LETALLGTPQ  VVCYRSNGRK  LAYKIMEKLL300
KVKYVSLPNL  IVNNSVVPEL  LVHKCTVESI  TRHLSPLLPG  SPERDWQLAG  YKTMRRRLGT360
TVATDYTARL  ICASLGIEVP  HGEALPAPAS  GTPSRKRRRK  SNSRKPQTTP  TP412

Enzyme Prediction      help

No EC number prediction in MGYG000000824_00060.

CAZyme Signature Domains help

Created with Snap204161821031231441641852062262472672883093293503703914358GT19
Family Start End Evalue family coverage
GT19 4 358 6.2e-116 0.9887005649717514

CDD Domains      download full data without filtering help

Created with Snap204161821031231441641852062262472672883093293503703911358lpxB1371LpxB5359LpxB5356lpxB1330PRK14089
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 1.66e-122 1 358 2 359
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 1.16e-115 1 371 2 375
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 1.72e-83 5 359 3 360
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 5.02e-74 5 356 10 357
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 2.53e-58 1 330 2 309
lipid-A-disaccharide synthase.

CAZyme Hits      help

Created with Snap204161821031231441641852062262472672883093293503703911371QQR08529.1|GT191371ASB37800.1|GT191371ANU64105.1|GT191371QCD36425.1|GT191375AHF12800.1|GT19
Hit ID E-Value Query Start Query End Hit Start Hit End
QQR08529.1 6.86e-143 1 371 1 370
ASB37800.1 6.86e-143 1 371 1 370
ANU64105.1 6.86e-143 1 371 1 370
QCD36425.1 2.02e-138 1 371 1 370
AHF12800.1 2.22e-125 1 375 1 373

PDB Hits      download full data without filtering help

Created with Snap2041618210312314416418520622624726728830932935037039153385W8S_A53385W8N_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 1.00e-37 5 338 11 345
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 2.68e-37 5 338 11 345
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Created with Snap204161821031231441641852062262472672883093293503703912371sp|Q1D393|LPXB_MYXXD1358sp|Q1INL4|LPXB_KORVE2376sp|Q39T49|LPXB_GEOMG7360sp|C1F718|LPXB_ACIC52379sp|Q74AT9|LPXB_GEOSL
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1D393 1.42e-72 2 371 6 374
Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxB PE=3 SV=1
Q1INL4 2.14e-71 1 358 2 357
Lipid-A-disaccharide synthase OS=Koribacter versatilis (strain Ellin345) OX=204669 GN=lpxB PE=3 SV=1
Q39T49 4.95e-70 2 376 8 381
Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1
C1F718 1.53e-69 7 360 11 373
Lipid-A-disaccharide synthase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / BCRC 80197 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161) OX=240015 GN=lpxB PE=3 SV=1
Q74AT9 6.54e-67 2 379 8 384
Lipid-A-disaccharide synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000040 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000824_00060.