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CAZyme Information: MGYG000001324_00114

You are here: Home > Sequence: MGYG000001324_00114

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusobacterium periodonticum_D
Lineage Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium periodonticum_D
CAZyme ID MGYG000001324_00114
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
356 MGYG000001324_1|CGC1 41373.57 7.8026
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001324 2472878 Isolate not provided not provided
Gene Location Start: 121349;  End: 122419  Strand: -

Full Sequence      Download help

MKFFVSTGEA  SGDLHLSYLV  KSVKSRYKDV  DFVGVAGEKS  KKEGVEILQD  ISELAIMGFT60
EAIKKYKFLK  QKAYEYLQYI  KDNQIENVIL  VDYGGFNVKF  LELLKNEIMD  IKIFYYIPPK120
VWIWGEKRVK  KLRLADYIMV  IFPWEVDFYK  KHNIDAVYFG  NPFTDFYKKV  ERTGDKILLL180
PGSRRQEIKA  MLPVFEEIIN  DLKDDKFILK  LNSEQDLVYT  ENLKKYTNLE  IIIDKKLKDI240
VGDCKLSVAT  SGTVTLELAL  FALPSIVVYK  TSLINYLIGK  YILKIGYISL  PNLVLDDEIF300
PELIQKDCEA  KNIEKHMKKI  LENLPEIEEK  IENMRKKIEG  KAVVESYADF  LVKEGK356

Enzyme Prediction      help

No EC number prediction in MGYG000001324_00114.

CAZyme Signature Domains help

Created with Snap17355371891061241421601781952132312492672843023203384336GT19
Family Start End Evalue family coverage
GT19 4 336 1.8e-99 0.9745762711864406

CDD Domains      download full data without filtering help

Created with Snap17355371891061241421601781952132312492672843023203381356LpxB1342lpxB4349LpxB5348lpxB1313PRK14089
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0763 LpxB 1.49e-137 1 356 2 380
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
PRK00025 lpxB 9.50e-92 1 342 2 363
lipid-A-disaccharide synthase; Reviewed
pfam02684 LpxB 2.75e-71 4 349 2 367
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 1.89e-65 5 348 10 379
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 2.49e-53 1 313 2 309
lipid-A-disaccharide synthase.

CAZyme Hits      help

Created with Snap17355371891061241421601781952132312492672843023203381356AVQ25371.1|GT191356ATV62380.1|GT191356ATV34727.1|GT191356ATV68843.1|GT191356ATV64160.1|GT19
Hit ID E-Value Query Start Query End Hit Start Hit End
AVQ25371.1 6.11e-255 1 356 1 356
ATV62380.1 2.04e-253 1 356 1 356
ATV34727.1 2.04e-253 1 356 1 356
ATV68843.1 8.31e-253 1 356 1 356
ATV64160.1 6.54e-250 1 356 1 356

PDB Hits      download full data without filtering help

Created with Snap173553718910612414216017819521323124926728430232033883235W8S_A83235W8N_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 5.75e-33 8 323 14 347
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 1.11e-32 8 323 14 347
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Created with Snap17355371891061241421601781952132312492672843023203382354sp|C0QR27|LPXB_PERMH2313sp|Q74AT9|LPXB_GEOSL5313sp|Q3JAC1|LPXB_NITOC2313sp|Q39T49|LPXB_GEOMG2351sp|B2V704|LPXB_SULSY
Hit ID E-Value Query Start Query End Hit Start Hit End Description
C0QR27 2.17e-51 2 354 3 375
Lipid-A-disaccharide synthase OS=Persephonella marina (strain DSM 14350 / EX-H1) OX=123214 GN=lpxB PE=3 SV=1
Q74AT9 4.83e-51 2 313 8 335
Lipid-A-disaccharide synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=lpxB PE=3 SV=1
Q3JAC1 5.18e-51 5 313 10 334
Lipid-A-disaccharide synthase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=lpxB PE=3 SV=1
Q39T49 1.87e-50 2 313 8 335
Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1
B2V704 3.26e-48 2 351 3 379
Lipid-A-disaccharide synthase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) OX=436114 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000076 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001324_00114.