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CAZyme Information: MGYG000001389_01169

You are here: Home > Sequence: MGYG000001389_01169

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cloacibacillus evryensis
Lineage Bacteria; Synergistota; Synergistia; Synergistales; Synergistaceae; Cloacibacillus; Cloacibacillus evryensis
CAZyme ID MGYG000001389_01169
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
377 MGYG000001389_5|CGC1 42171.4 6.3974
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001389 3281561 Isolate not provided not provided
Gene Location Start: 174327;  End: 175460  Strand: -

Full Sequence      Download help

MSIFISSGEA  SGDHYTANLA  KRLRAGGYSG  DIWGMGGVES  REAGIRVEWH  GERLQLLGLT60
EVISAIPSIF  ALRNEMVERI  LTESPEAVIV  CDSPDYHMRL  ISKLRSRGYR  GRIFYISPPS120
VWAWRSGRAN  DLRRNVDECL  PLFKFEHEYL  LSRGCVSHWR  GYPLAEEFRR  LAAEPSPLDG180
SFDRERLVAF  LPGSRRSEVT  ALLPMMREAA  AVLAERGWQP  VFSVAPGLNP  AVRDGMIEKF240
TKDGVLFYDG  PGHDLMAAAR  CAVGASGTIT  VESLLLGCYM  VVTYKLNPIS  AFVARCVIKT300
PYYAMANILA  GEEMFPELLQ  EKATVDNILG  HTLEWLEGEG  DFRAETEKTM  RRARLTLGEE360
GVYDFWSKRI  MEASARC377

Enzyme Prediction      help

No EC number prediction in MGYG000001389_01169.

CAZyme Signature Domains help

Created with Snap18375675941131311501691882072262452632823013203393583354GT19
Family Start End Evalue family coverage
GT19 3 354 1.8e-87 0.9830508474576272

CDD Domains      download full data without filtering help

Created with Snap18375675941131311501691882072262452632823013203393581362LpxB3363LpxB1358lpxB2362lpxB2329lpxB
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0763 LpxB 4.91e-92 1 362 2 367
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 9.62e-83 3 363 1 364
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
PRK00025 lpxB 2.37e-82 1 358 2 362
lipid-A-disaccharide synthase; Reviewed
TIGR00215 lpxB 1.05e-53 2 362 7 374
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK01021 lpxB 1.92e-45 2 329 228 569
lipid-A-disaccharide synthase; Reviewed

CAZyme Hits      help

Created with Snap18375675941131311501691882072262452632823013203393581375ANZ45970.1|GT191376AER66289.1|GT191376QVL35430.1|GT191376QTX31623.1|GT191376AFM20975.1|GT19
Hit ID E-Value Query Start Query End Hit Start Hit End
ANZ45970.1 1.69e-242 1 375 1 375
AER66289.1 3.15e-102 1 376 1 372
QVL35430.1 1.97e-92 1 376 1 372
QTX31623.1 1.97e-92 1 376 1 372
AFM20975.1 4.97e-86 1 376 1 367

PDB Hits      download full data without filtering help

Created with Snap183756759411313115016918820722624526328230132033935813225W8S_A13225W8N_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 1.23e-32 1 322 7 331
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 2.35e-32 1 322 7 331
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Created with Snap18375675941131311501691882072262452632823013203393581341sp|C1DST3|LPXB_AZOVD3372sp|Q1D393|LPXB_MYXXD3361sp|Q6ALW0|LPXB_DESPS3341sp|Q02AZ6|LPXB_SOLUE1328sp|Q0A7J2|LPXB_ALKEH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
C1DST3 3.70e-52 1 341 5 349
Lipid-A-disaccharide synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=lpxB PE=3 SV=1
Q1D393 1.10e-51 3 372 7 376
Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxB PE=3 SV=1
Q6ALW0 3.25e-51 3 361 12 373
Lipid-A-disaccharide synthase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) OX=177439 GN=lpxB PE=3 SV=1
Q02AZ6 2.19e-50 3 341 4 340
Lipid-A-disaccharide synthase OS=Solibacter usitatus (strain Ellin6076) OX=234267 GN=lpxB PE=3 SV=1
Q0A7J2 2.52e-48 1 328 1 333
Lipid-A-disaccharide synthase OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.998093 0.001797 0.000102 0.000008 0.000005 0.000019

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001389_01169.