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CAZyme Information: MGYG000001663_00158

You are here: Home > Sequence: MGYG000001663_00158

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900760675
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900760675
CAZyme ID MGYG000001663_00158
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
377 42605.02 7.5063
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001663 3090424 MAG United States North America
Gene Location Start: 159523;  End: 160656  Strand: +

Full Sequence      Download help

MKYYLIAGEP  SGDLHGANLI  EGLKKADSAA  QFRFWGGDRM  AAAGGEANLA  KHYRETSFFG60
IVQVLKNLGT  IKRQMRECQA  DVETFAPDVL  ILVDYPGFNM  KMAKWAHEKG  IRTFYYIAPK120
VWAWREHRVK  SIRRYVDKLF  IIFPFEREYF  PKHGIEPIFE  GNPLVDAIEA  RRAELPSPEE180
FRRRNGLDNR  PIIALLAGSR  RGEIRDNLPL  MALLSKKFPG  HQFVVAGVSW  LDRPLYEQYM240
GGSDIRYVCD  QTYETLAAAE  AAVVTSGTAT  LETALLGIPE  VVVYRTLWFQ  VKLRPYVLKV300
PWVSLVNLNL  GREAVVEIIQ  SDLDTTQAEH  ELHAIIEGGE  KRGKMLADFN  ELSSVIGGPG360
ASDRFAARMV  EELQQNK377

Enzyme Prediction      help

No EC number prediction in MGYG000001663_00158.

CAZyme Signature Domains help

Created with Snap18375675941131311501691882072262452632823013203393584354GT19
Family Start End Evalue family coverage
GT19 4 354 8.3e-106 0.9830508474576272

CDD Domains      download full data without filtering help

Created with Snap18375675941131311501691882072262452632823013203393581377lpxB1375LpxB4344LpxB5371lpxB1324PRK14089
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 2.89e-102 1 377 2 378
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 4.42e-100 1 375 2 381
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 1.19e-71 4 344 2 347
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 7.95e-65 5 371 10 384
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 2.43e-45 1 324 2 305
lipid-A-disaccharide synthase.

CAZyme Hits      help

Created with Snap18375675941131311501691882072262452632823013203393581373AFL77950.1|GT191374BBL11605.1|GT191374BBL08813.1|GT191374BBL00808.1|GT191376BBL06737.1|GT19
Hit ID E-Value Query Start Query End Hit Start Hit End
AFL77950.1 3.51e-240 1 373 1 373
BBL11605.1 6.47e-236 1 374 1 374
BBL08813.1 6.47e-236 1 374 1 374
BBL00808.1 9.19e-236 1 374 1 374
BBL06737.1 4.96e-217 1 376 1 376

PDB Hits      download full data without filtering help

Created with Snap183756759411313115016918820722624526328230132033935853755W8N_A53755W8S_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8N_A 1.75e-39 5 375 11 382
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]
5W8S_A 1.75e-39 5 375 11 382
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Created with Snap18375675941131311501691882072262452632823013203393585376sp|Q2LVL8|LPXB_SYNAS2377sp|Q39T49|LPXB_GEOMG2373sp|Q74AT9|LPXB_GEOSL2373sp|Q1D393|LPXB_MYXXD2376sp|B3E4H8|LPXB_TRIL1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2LVL8 9.19e-63 5 376 8 381
Lipid-A-disaccharide synthase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=lpxB PE=3 SV=1
Q39T49 3.70e-62 2 377 8 384
Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1
Q74AT9 7.99e-61 2 373 8 380
Lipid-A-disaccharide synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=lpxB PE=3 SV=1
Q1D393 1.09e-60 2 373 6 378
Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxB PE=3 SV=1
B3E4H8 6.03e-60 2 376 8 383
Lipid-A-disaccharide synthase OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000060 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001663_00158.