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CAZyme Information: MGYG000002113_00273

You are here: Home > Sequence: MGYG000002113_00273

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Anaerovibrio sp900548165
Lineage Bacteria; Firmicutes_C; Negativicutes; Selenomonadales; Selenomonadaceae; Anaerovibrio; Anaerovibrio sp900548165
CAZyme ID MGYG000002113_00273
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
384 MGYG000002113_9|CGC2 42140.11 7.3481
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002113 1986108 MAG Mongolia Asia
Gene Location Start: 6434;  End: 7588  Strand: +

Full Sequence      Download help

MKIMLSAGEA  SGDLHGEGLA  KAIHQLKPEA  ELIGFGGPKM  AEAGVRLCAD  MREYSIMGVW60
EVIKNLSRIF  DLLKKLTNFM  AEEKPDLLVL  IDYPDFNWRL  AAKARKMGIP  VFSYIPPSAW120
AWRKGRAKKC  AALANELAAI  FPFELPVYQA  AGANISFQGN  PLIDMVKSTM  TVLEAREYFQ180
VPADGEPVLL  LPGSRKQEIQ  GLFPTMLEAA  ELLTKERPQL  RFYVPVASGI  DEGVLAAMAA240
EHTVDIHFTH  DKNYDLMNIG  SFAIATSGTV  VLEAAIMGLP  CVALYRMASL  SYAIGKMLVK300
IDNFTLPNIL  AGRTVQQELL  QDQVTGPKVY  EAARRFYAES  GYKEQVLQGL  QEAVAKLGAP360
GATARVAKRI  VAAAEKYSRT  EDIR384

Enzyme Prediction      help

No EC number prediction in MGYG000002113_00273.

CAZyme Signature Domains help

Created with Snap19385776961151341531721922112302492682883073263453643356GT19
Family Start End Evalue family coverage
GT19 3 356 6.5e-115 0.9887005649717514

CDD Domains      download full data without filtering help

Created with Snap19385776961151341531721922112302492682883073263453641376lpxB1376LpxB3348LpxB3372lpxB1357PRK14089
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 2.73e-126 1 376 2 377
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 2.46e-116 1 376 2 381
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 9.76e-96 3 348 1 352
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 1.70e-88 3 372 8 384
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 1.72e-52 1 357 2 343
lipid-A-disaccharide synthase.

CAZyme Hits      help

Created with Snap19385776961151341531721922112302492682883073263453641378BAL84303.1|GT191374AEC00856.1|GT191376AME03197.1|GT191376AKT54064.1|GT191374ANR70602.1|GT19
Hit ID E-Value Query Start Query End Hit Start Hit End
BAL84303.1 1.12e-149 1 378 1 378
AEC00856.1 5.32e-141 1 374 1 374
AME03197.1 1.63e-139 1 376 1 376
AKT54064.1 6.59e-139 1 376 1 376
ANR70602.1 5.00e-138 1 374 1 374

PDB Hits      download full data without filtering help

Created with Snap193857769611513415317219221123024926828830732634536413325W8S_A13325W8N_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 2.21e-53 1 332 7 340
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 6.11e-53 1 332 7 340
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Created with Snap19385776961151341531721922112302492682883073263453642367sp|Q74AT9|LPXB_GEOSL2367sp|Q39T49|LPXB_GEOMG2376sp|B3E4H8|LPXB_TRIL12371sp|Q1D393|LPXB_MYXXD3367sp|Q2LVL8|LPXB_SYNAS
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q74AT9 1.81e-93 2 367 8 373
Lipid-A-disaccharide synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=lpxB PE=3 SV=1
Q39T49 5.85e-89 2 367 8 373
Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1
B3E4H8 4.05e-86 2 376 8 382
Lipid-A-disaccharide synthase OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=lpxB PE=3 SV=1
Q1D393 9.08e-85 2 371 6 375
Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxB PE=3 SV=1
Q2LVL8 5.11e-84 3 367 6 371
Lipid-A-disaccharide synthase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000039 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002113_00273.