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CAZyme Information: MGYG000002603_00077

You are here: Home > Sequence: MGYG000002603_00077

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900767615
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900767615
CAZyme ID MGYG000002603_00077
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
473 MGYG000002603_1|CGC2 54385.87 8.3762
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002603 2739364 MAG China Asia
Gene Location Start: 95936;  End: 97357  Strand: +

Full Sequence      Download help

MKYYLIVGEA  SGDLHASRLM  RSLKNVDEFA  EFRFFGGDLM  AAEGGTRVKH  YKELAYMGFV60
PVLLHLRTIF  ANMKKCKEDI  VKWRPDVVIL  VDYPGFNLNI  AKFLKKKTNV  PAYYYISPKI120
WAWKEWRIRS  IKRDIAELFS  ILPFEVPFFE  KKHRYSIHYV  GNPTAEEVAA  FRASYKQTAL180
EFCQENNLDV  HRPIIALLAG  SRLQEIKDNL  PAMIEVAERF  EDYQMVLAGA  PSIEDAYYEK240
FLKGTPVKLV  RNKTYPLLTH  ATAALVTSGT  ATLETALFDV  PQVVCYETPL  PRLVRFAFKH300
VMSCKYISLV  NLIADKEVVQ  EMFADRFKVD  AIADQLYQIL  PGMEGRERML  AEYREVRERL360
GNQVAPDEAA  AIMYDLLVKR  REMLLKLARE  RAEAEAKAAA  EAAERARLKA  LSEAEAAKKK420
AEQEAEAARL  KAEREAELAR  RRAEEARRLA  EEETERARRA  EEQLNQSQQE  ELK473

Enzyme Prediction      help

No EC number prediction in MGYG000002603_00077.

CAZyme Signature Domains help

Created with Snap234770941181411651892122362602833073313543784024254494360GT19
Family Start End Evalue family coverage
GT19 4 360 7.5e-110 0.9887005649717514

CDD Domains      download full data without filtering help

Created with Snap234770941181411651892122362602833073313543784024254491381lpxB1377LpxB4372LpxB5373lpxB1362PRK14089
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 2.45e-93 1 381 2 379
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 2.84e-87 1 377 2 379
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 4.16e-62 4 372 2 373
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 5.79e-53 5 373 10 383
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 1.59e-42 1 362 2 334
lipid-A-disaccharide synthase.

CAZyme Hits      help

Created with Snap234770941181411651892122362602833073313543784024254491392QNT66516.1|GT191381QUB61849.1|GT191381QUB84094.1|GT191381QUB65076.1|GT191381QUB73930.1|GT19
Hit ID E-Value Query Start Query End Hit Start Hit End
QNT66516.1 7.18e-242 1 392 1 392
QUB61849.1 1.24e-202 1 381 1 380
QUB84094.1 1.91e-202 1 381 1 380
QUB65076.1 5.03e-202 1 381 1 380
QUB73930.1 1.44e-201 1 381 1 380

PDB Hits      download full data without filtering help

Created with Snap2347709411814116518921223626028330733135437840242544953735W8N_A53735W8S_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8N_A 6.35e-29 5 373 11 378
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]
5W8S_A 6.35e-29 5 373 11 378
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Created with Snap234770941181411651892122362602833073313543784024254495377sp|Q1D393|LPXB_MYXXD5381sp|Q39T49|LPXB_GEOMG5377sp|B3E4H8|LPXB_TRIL15361sp|Q3JAC1|LPXB_NITOC5380sp|Q74AT9|LPXB_GEOSL
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1D393 4.22e-58 5 377 9 378
Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxB PE=3 SV=1
Q39T49 1.67e-57 5 381 11 384
Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1
B3E4H8 3.37e-56 5 377 11 380
Lipid-A-disaccharide synthase OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=lpxB PE=3 SV=1
Q3JAC1 5.77e-54 5 361 10 363
Lipid-A-disaccharide synthase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=lpxB PE=3 SV=1
Q74AT9 1.05e-53 5 380 11 383
Lipid-A-disaccharide synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000072 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002603_00077.