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CAZyme Information: MGYG000003498_00328

You are here: Home > Sequence: MGYG000003498_00328

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA7173 sp900768685
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; UBA7173; UBA7173 sp900768685
CAZyme ID MGYG000003498_00328
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
376 MGYG000003498_12|CGC1 41611.37 9.2835
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003498 2015725 MAG Fiji Oceania
Gene Location Start: 264;  End: 1394  Strand: -

Full Sequence      Download help

MRYFLIAGEA  SGDLHASELI  RAIKSYDPEA  SFRFLGGDKM  AEAAGVQPVV  HYKKMAYMGF60
VDVLLHLRSV  LGNLDAAKKS  LKDFSPDALV  LIDYPSFNLR  VAKYAVTLGI  PVYYYISPKV120
WAWKEHRVKE  IKKLVKQMFC  ILPFEVDFYK  TRHNYDVTYV  GNPSLNEVDR  KLAEIVSKED180
FYKSNALSSK  PLIALVPGSR  ISEIKTNLPY  MLGAAKNFES  DYQPVIAAAP  GVDEEIYDRL240
APGVTRLSGQ  TFELMRYASA  ALVTSGTATL  EAALLGTPQV  VAYRAVGSKL  VYNFFKKILK300
VQFVSLPNLI  CGREIVKELL  LHLCTVDSLS  AALADILPGG  SHHSALLADY  AHLRTLLGTN360
NAPQTAAQII  SRQLQK376

Enzyme Prediction      help

No EC number prediction in MGYG000003498_00328.

CAZyme Signature Domains help

Created with Snap18375675941121311501691882062252442632823003193383574357GT19
Family Start End Evalue family coverage
GT19 4 357 4.8e-108 0.9887005649717514

CDD Domains      download full data without filtering help

Created with Snap18375675941121311501691882062252442632823003193383571376lpxB1370LpxB4370LpxB5368lpxB1329PRK14089
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 2.35e-109 1 376 2 377
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 1.19e-107 1 370 2 375
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 6.54e-81 4 370 2 374
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 5.06e-74 5 368 10 380
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 1.35e-50 1 329 2 309
lipid-A-disaccharide synthase.

CAZyme Hits      help

Created with Snap18375675941121311501691882062252442632823003193383571370QQR08529.1|GT191370ASB37800.1|GT191370ANU64105.1|GT191370QCD36425.1|GT191374QUB68537.1|GT19
Hit ID E-Value Query Start Query End Hit Start Hit End
QQR08529.1 7.90e-145 1 370 1 370
ASB37800.1 7.90e-145 1 370 1 370
ANU64105.1 7.90e-145 1 370 1 370
QCD36425.1 2.17e-143 1 370 1 370
QUB68537.1 1.27e-123 1 374 1 376

PDB Hits      download full data without filtering help

Created with Snap183756759411213115016918820622524426328230031933835753705W8S_A53705W8N_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 8.44e-42 5 370 11 377
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 1.64e-41 5 370 11 377
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Created with Snap18375675941121311501691882062252442632823003193383572370sp|Q1D393|LPXB_MYXXD2376sp|B3E4H8|LPXB_TRIL15376sp|Q2LVL8|LPXB_SYNAS5339sp|Q6ALW0|LPXB_DESPS2376sp|Q39T49|LPXB_GEOMG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1D393 1.00e-68 2 370 6 374
Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxB PE=3 SV=1
B3E4H8 6.76e-66 2 376 8 382
Lipid-A-disaccharide synthase OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=lpxB PE=3 SV=1
Q2LVL8 1.62e-63 5 376 8 380
Lipid-A-disaccharide synthase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=lpxB PE=3 SV=1
Q6ALW0 1.36e-62 5 339 14 352
Lipid-A-disaccharide synthase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) OX=177439 GN=lpxB PE=3 SV=1
Q39T49 7.11e-62 2 376 8 382
Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000040 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003498_00328.