You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001035_00041
You are here: Home > Sequence: MGYG000001035_00041
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudomonas_E putida_P | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E putida_P | |||||||||||
| CAZyme ID | MGYG000001035_00041 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | Linear gramicidin synthase subunit D | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 1903; End: 6003 Strand: - | |||||||||||
Full Sequence Download help
| MVSRARQAGI RFTPKQLFQY QTVEQLAAVA EVGEQVADDP VTSSQQPSLA GLTQTQLQHL | 60 |
| PVPVAQVDAI YPLSPMQQGM LFYSDQGGDA ALYLNQTSVA VDGLDIERFT QAWKQVVARH | 120 |
| DILRTSFWSD AQLAQPLQIV HRHVELPIRV LDWRARDDQA DALQALVDAD AEQAFDLSQA | 180 |
| PLMRVTLVRL DEQRMQLIWT RHHILMDGWS NSRLLGEVFQ AYHGQALDTQ VPRFGDYIRW | 240 |
| LEAQPQDELE AFWTRKLGSL ESSTLLEQTL LPRPDANLPG HAALYLHWDA RRTERLRAQA | 300 |
| QRLRVTPNTL VQAAWLLLLQ RYSGQQAVCF GATVAGRPAN LPGVDNMLGL FINTLPVVQA | 360 |
| PAAHWRVNDW LQQLQAYNLE LRDHEHATLS NVQRWAGRPG QPLFDSIIVF ENYPLDERLN | 420 |
| DSGDSALQFG AVSERGVTNY AMDLAVHLSE TLSVEFMYLR GSFSEAAVAV IRGSFERLLE | 480 |
| GMLDNPDATL GSLDMLTLEQ SQQTRQRNTL AAATTHVAHL ARSIAEHARL RPDALAVVCG | 540 |
| DQQLSYAQLD QRANRLAHHL IALGTKPEST VGIALERSVE VIVAFLAVMK TGAAYVPLDI | 600 |
| DYPQDRLQWI VEDSAMHLLL TNSALSQRFD TVGRIVELDR LALAGLPDGV PRARVEDDNL | 660 |
| AYLIYTSGST GKPKGVAVSH GQIRMHCQAI AELYEMDEST RELLFMSFAF DGAQERWLST | 720 |
| LSSGGCLVIR GNRLWTAEET WQVLHEQRID IACFPPAYLQ QLAEFGESQQ QVAPPVRIYC | 780 |
| FGGDAVPDAL FELVKRTLRP QYLTNGYGPT ETVVTPLLWK VSADQSCQAV YAPIGDRVGL | 840 |
| RTLQVLDQDL NPLPDGVAGE LYIGGEGLAR GYHQRAALTA ERFVADPFAE GARLYRTGDR | 900 |
| VRRRADGTLD FIGRLDNQLK IRGFRIEPGE IEARLRNLAD VRDAVVVARE GATGKQLVGY | 960 |
| VVSGSENTNP AQLREALRTE LPDYMVPAQL VVLEAMPLTP NGKVDRKALP APDFAAHRQH | 1020 |
| RAPRNEAELA LAHIWQDVLG VESIGVDDNF FELGGDSLRV LKMLSKVRAH SDLALDLKLR | 1080 |
| DVMAKPTIGE LSGYSADEAC LDPVLLLNTR VAHATPLFCL HAGFGTVFDY EPLARRLEGH | 1140 |
| CSVYGVQCRM LLDRTWQDES LQAMAIDYAQ YIRQKQPAGP YRLAGWSLGG TLAVLVTKEL | 1200 |
| ERQGQTVALL GLVDSFVPCA LHTEVAEDWT EDLQGFLSVL LGVPKDRLAV PELAVGTDVS | 1260 |
| TLQGAIEAVR AAQTEPSLYA DIDSSELAHT FAVAMRLKAL SLNLTSLPPT QALATCWWAG | 1320 |
| RNGDAAWTFA TKASHAVEAG HYDILRQREV IDGLAMHWLK EGSMVE | 1366 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK12316 | PRK12316 | 0.0 | 2 | 1093 | 2554 | 3620 | peptide synthase; Provisional |
| PRK12467 | PRK12467 | 0.0 | 2 | 1093 | 1068 | 2161 | peptide synthase; Provisional |
| PRK12316 | PRK12316 | 0.0 | 15 | 1164 | 1494 | 2649 | peptide synthase; Provisional |
| PRK12316 | PRK12316 | 0.0 | 61 | 1092 | 40 | 1081 | peptide synthase; Provisional |
| PRK12316 | PRK12316 | 0.0 | 23 | 1092 | 4056 | 5136 | peptide synthase; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QND46664.1 | 3.66e-160 | 70 | 1279 | 1614 | 2840 |
| BAZ00088.1 | 2.82e-150 | 8 | 1218 | 2196 | 3417 |
| BAZ75991.1 | 2.82e-150 | 8 | 1218 | 2196 | 3417 |
| BAY90071.1 | 1.36e-148 | 8 | 1218 | 2187 | 3408 |
| BAY30132.1 | 6.07e-148 | 16 | 1218 | 2206 | 3419 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2VSQ_A | 4.67e-162 | 66 | 1216 | 8 | 1149 | Structureof surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module [Bacillus subtilis] |
| 6MFZ_A | 1.88e-123 | 1 | 1098 | 737 | 1800 | Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis] |
| 6P1J_A | 2.64e-120 | 71 | 1009 | 6 | 964 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae],6P1J_B The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae] |
| 5U89_A | 1.61e-114 | 532 | 1097 | 38 | 604 | Crystalstructure of a cross-module fragment from the dimodular NRPS DhbF [Geobacillus sp. Y4.1MC1] |
| 4ZXH_A | 6.26e-113 | 155 | 1251 | 99 | 1201 | ChainA, ABBFA_003403 [Acinetobacter baumannii AB307-0294],4ZXI_A Chain A, Tyrocidine synthetase 3 [Acinetobacter baumannii AB307-0294] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q70LM5 | 4.96e-203 | 49 | 1092 | 2587 | 3625 | Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis OX=54914 GN=lgrC PE=3 SV=1 |
| Q9R9I9 | 5.24e-202 | 56 | 1253 | 1315 | 2507 | Mycosubtilin synthase subunit C OS=Bacillus subtilis OX=1423 GN=mycC PE=3 SV=1 |
| Q70LM4 | 2.91e-199 | 67 | 1096 | 4 | 1034 | Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1 |
| Q70LM6 | 3.14e-188 | 49 | 1113 | 2563 | 3632 | Linear gramicidin synthase subunit B OS=Brevibacillus parabrevis OX=54914 GN=lgrB PE=1 SV=1 |
| Q9R9J0 | 1.17e-178 | 64 | 1092 | 1312 | 2342 | Mycosubtilin synthase subunit B OS=Bacillus subtilis OX=1423 GN=mycB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000068 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |