You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000003040_00045
You are here: Home > Sequence: MGYG000003040_00045
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella sp900556705 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900556705 | |||||||||||
| CAZyme ID | MGYG000003040_00045 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 12094; End: 14580 Strand: - | |||||||||||
Full Sequence Download help
| MSIKRLALCR SQGRLFVLLR FAGQDVAALI EREGSQAFAH ATTSGSCVPS LVLPVDHGRV | 60 |
| LALCPSVSDY ERELAVLVLP FLDGSSMNVV FASGGQRLGS IRLDSRVAKL ESKINYKAKP | 120 |
| ALCALIRDAQ RGEHCGRYEI DAIRYLPADA GAVWRYEVTW VGDSKCTPEL QIFDAHMNAI | 180 |
| DVTVHVFESQ IDVPQQNGCR VNKTYLSVEM PQDIRDFVAI AIDPAGQIQS GFCAMDGRLY | 240 |
| NGMVDDSWNR MKDARADDAA YRRWFEQHRA KPGDLTCQRV ASAAFAHRPL VSIVVPCYKT | 300 |
| DRVYLRELLD SMLAQSYDNW ELLLMDASPE WDAVANLAAA ANDERVCRIE LPGNGGIVVN | 360 |
| TNAGIEQAMG DYIAFLDHDD ILEPDALFQY VSALNKAAEG ERPQVLFCDE DMFQKTGEWG | 420 |
| QPVFKTKLNV DLLYSHNCVT HFLMVEKALI DRIGMSPEDV AGAQDYDLTL RCLAAGARFE | 480 |
| HIAHMLYHWR VHPGSTADGT ADSKPYAIEA GRLALQRHFN ALGVHGTVEE TETPFVYRMR | 540 |
| YALPEPAPLV SIVIPTKDHV ETLDACVMSI AQKATYANYE IVLVENNSED PETFAYYETL | 600 |
| PERVAAASKG KGIARVVYWP GEFNYSQIIN FGVEHAKGDY LMLLNNDTEV ISPDFIEEMM | 660 |
| GYLQRPDAGV VGAKLYFADH LVQHAGILVG VRGALAHANQ DFSAKREGYL ARAVRPGNFS | 720 |
| AVTGACQMVR RDVFEQVGGY SEEFAVGFND ADFCLRVWEA GFRTIFTPYA ELYHYEFTSR | 780 |
| GREEANEEKL RRWKREQALF MQRWPEFFLT GDPWLGPNLS SESEYFSL | 828 |
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT2 | 551 | 737 | 3.6e-22 | 0.9882352941176471 |
| GT2 | 292 | 451 | 7.2e-22 | 0.9764705882352941 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd04184 | GT2_RfbC_Mx_like | 1.33e-83 | 289 | 491 | 1 | 202 | Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| cd04186 | GT_2_like_c | 1.31e-41 | 552 | 776 | 1 | 166 | Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| COG1216 | GT2 | 1.37e-31 | 548 | 801 | 3 | 248 | Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]. |
| pfam00535 | Glycos_transf_2 | 3.45e-22 | 551 | 734 | 1 | 164 | Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. |
| COG1215 | BcsA | 7.10e-22 | 548 | 770 | 54 | 260 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZH69434.1 | 0.0 | 1 | 828 | 1 | 828 |
| QIA33434.1 | 0.0 | 1 | 828 | 1 | 828 |
| ATP53737.1 | 0.0 | 1 | 827 | 1 | 827 |
| QOY61397.1 | 1.16e-294 | 1 | 828 | 1 | 801 |
| ACV56006.1 | 1.10e-178 | 1 | 828 | 1 | 829 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5HEA_A | 9.41e-10 | 290 | 415 | 6 | 126 | CgTstructure in hexamer [Streptococcus parasanguinis FW213],5HEA_B CgT structure in hexamer [Streptococcus parasanguinis FW213],5HEA_C CgT structure in hexamer [Streptococcus parasanguinis FW213],5HEC_A CgT structure in dimer [Streptococcus parasanguinis FW213],5HEC_B CgT structure in dimer [Streptococcus parasanguinis FW213] |
| 2Z86_A | 2.13e-09 | 278 | 497 | 364 | 579 | Crystalstructure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP [Escherichia coli],2Z86_B Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP [Escherichia coli],2Z86_C Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP [Escherichia coli],2Z86_D Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP [Escherichia coli] |
| 2Z87_A | 2.13e-09 | 278 | 497 | 363 | 578 | Crystalstructure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GalNAc and UDP [Escherichia coli],2Z87_B Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GalNAc and UDP [Escherichia coli] |
| 3BCV_A | 6.41e-06 | 289 | 385 | 5 | 100 | Crystalstructure of a putative glycosyltransferase from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3BCV_B Crystal structure of a putative glycosyltransferase from Bacteroides fragilis [Bacteroides fragilis NCTC 9343] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P55465 | 2.99e-112 | 258 | 828 | 338 | 897 | Uncharacterized protein y4gI OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03550 PE=4 SV=1 |
| Q50864 | 4.30e-74 | 271 | 818 | 301 | 822 | O-antigen biosynthesis protein RfbC OS=Myxococcus xanthus OX=34 GN=rfbC PE=4 SV=1 |
| Q4UM29 | 2.31e-16 | 289 | 664 | 14 | 397 | Uncharacterized glycosyltransferase RF_0543 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=RF_0543 PE=3 SV=1 |
| Q68X33 | 2.60e-16 | 287 | 498 | 6 | 218 | Uncharacterized glycosyltransferase RT0329 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=RT0329 PE=3 SV=1 |
| Q9ZDI9 | 6.32e-16 | 287 | 498 | 6 | 218 | Uncharacterized glycosyltransferase RP339 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP339 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000047 | 0.000003 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |