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CAZyme Information: MGYG000003266_00088
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella sp900762015 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900762015 | |||||||||||
| CAZyme ID | MGYG000003266_00088 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 927; End: 3413 Strand: - | |||||||||||
Full Sequence Download help
| MSIKRLALCR SQGRLFVLLR FAGKDVAEII ECEGSQAFAH ATTNGASVPS LALPIDHGRV | 60 |
| LALCPSVAGC ERELAVLVLP FLDGSAIDVD FASGGQKLGS IRLDSRKAKL ESKINYKAKP | 120 |
| ALCALIRDAQ RGERCGRYEI DAVRYLPADS GAVWRYEVTW AGDPQCTPQL RILDTHMNAI | 180 |
| DATVHVFESQ VDVPQQNGCR VNKTYLSVEM PEDIRDFVAI ATDSAGQIQG GFCAMDGRLY | 240 |
| NGMVDDSWHR MKDARADEAA YRRWFERHRA KPGDLACQRA ASAAFAYRPL LSIVVPCYKT | 300 |
| DRVYLRELLD SVFAQSYDNW ELLLMDASPE WDAVANLAAA DRDERVRRIE LPGNGGIVVN | 360 |
| TNDGIQQAMG DYIAFLDHDD ILEPDALFHY VAALNKTAKD ERPQVLFCDE DMFQKTGEWG | 420 |
| QPVFKTKLNV DLLYSHNCVT HFLMVEKALI DRIGMSPEDV AGAQDYDLTL RCLASGARFE | 480 |
| HVAHVLYHWR VHPGSTADGS ADSKPYAIEA GRLALQRHFD SLGVHGTVEE SETPFVYRMR | 540 |
| YALPEPAPLV SIVIPTKDHV ETLDACVMSI AQKATYANYE IVLVENNSEV PETFAYYETL | 600 |
| PERVAAASGG KGAARVEWWP GEFNYSQIIN FGVKHAKGDY LLLLNNDTEV ISPDFIEEMM | 660 |
| GYLQRPDAGV VGAKLYFADH LVQHAGILVG VRGALAHANQ DFSAKREGYL ARAVRPGNFS | 720 |
| AVTGACQMVR RDVFEQVGGY NEEFAVGFND ADFCLRVREA GYRTIFTPYA ELYHYEFTSR | 780 |
| GREEASEEKL RRWKREQALF MQHWPEFFLD GDPWLGPNLS SDSEYFSF | 828 |
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT2 | 292 | 451 | 1.1e-21 | 0.9764705882352941 |
| GT2 | 551 | 737 | 8.9e-21 | 0.9882352941176471 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd04184 | GT2_RfbC_Mx_like | 2.12e-87 | 289 | 491 | 1 | 202 | Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| cd04186 | GT_2_like_c | 4.67e-39 | 552 | 776 | 1 | 166 | Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| COG1216 | GT2 | 7.39e-32 | 548 | 804 | 3 | 251 | Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]. |
| cd06433 | GT_2_WfgS_like | 7.16e-21 | 292 | 496 | 1 | 200 | WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| COG1215 | BcsA | 1.22e-20 | 548 | 770 | 54 | 260 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIA33434.1 | 0.0 | 1 | 827 | 1 | 827 |
| ATP53737.1 | 0.0 | 1 | 828 | 1 | 828 |
| AZH69434.1 | 0.0 | 1 | 827 | 1 | 827 |
| QOY61397.1 | 1.01e-295 | 1 | 826 | 1 | 799 |
| ACV56016.1 | 1.42e-181 | 66 | 825 | 37 | 788 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2Z87_A | 9.97e-08 | 278 | 497 | 363 | 578 | Crystalstructure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GalNAc and UDP [Escherichia coli],2Z87_B Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GalNAc and UDP [Escherichia coli] |
| 2Z86_A | 9.98e-08 | 278 | 497 | 364 | 579 | Crystalstructure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP [Escherichia coli],2Z86_B Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP [Escherichia coli],2Z86_C Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP [Escherichia coli],2Z86_D Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P55465 | 2.07e-113 | 258 | 826 | 338 | 895 | Uncharacterized protein y4gI OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03550 PE=4 SV=1 |
| Q50864 | 2.13e-77 | 271 | 820 | 301 | 832 | O-antigen biosynthesis protein RfbC OS=Myxococcus xanthus OX=34 GN=rfbC PE=4 SV=1 |
| Q68X33 | 1.07e-16 | 287 | 498 | 6 | 218 | Uncharacterized glycosyltransferase RT0329 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=RT0329 PE=3 SV=1 |
| Q9ZDI9 | 4.70e-16 | 287 | 498 | 6 | 218 | Uncharacterized glycosyltransferase RP339 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP339 PE=3 SV=1 |
| Q4UM29 | 5.32e-16 | 287 | 664 | 12 | 397 | Uncharacterized glycosyltransferase RF_0543 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=RF_0543 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000046 | 0.000004 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |