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CAZyme Information: MGYG000004886_00173

You are here: Home > Sequence: MGYG000004886_00173

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Rothia;
CAZyme ID MGYG000004886_00173
CAZy Family GT25
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
273 30463.68 6.9604
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004886 1517427 MAG China Asia
Gene Location Start: 1146;  End: 1967  Strand: +

Full Sequence      Download help

MAKILKYVLG  LDGANRFDSF  FSVGAPAQGF  QRYSAVDNRD  NHVTDAQFDS  KLFLTRYGKE60
PRPAEKGCAL  SHYQMWKDFL  ASDADWALLA  EDDVLISPDL  QPVVERIIEK  YPHVQMVNLG120
DIYASEAGKL  NPQVDYPRLS  LLSPFVYGKY  RMGSAYGSKP  LYGAALYLLS  RSGAERLVEC180
YGETVPGVVA  DDYSLYREWG  VDVYLVQPGL  CGWEGTSLIQ  TSGVRHLESL  KSTQHGTGFI240
DRLRIALAPK  KRIANAKNIL  DATLEDVKQR  LGR273

Enzyme Prediction      help

No EC number prediction in MGYG000004886_00173.

CAZyme Signature Domains help

Created with Snap132740546881951091221361501631771912042182322452597181GT25
Family Start End Evalue family coverage
GT25 7 181 9.8e-23 0.9116022099447514

CDD Domains      download full data without filtering help

Created with Snap132740546881951091221361501631771912042182322452593099Glyco_transf_2530195Glyco_transf_257257COG3306
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd06532 Glyco_transf_25 1.41e-17 30 99 28 98
Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.
pfam01755 Glyco_transf_25 3.58e-14 30 195 30 200
Glycosyltransferase family 25 (LPS biosynthesis protein). Members of this family belong to Glycosyltransferase family 25 This is a family of glycosyltransferases involved in lipopolysaccharide (LPS) biosynthesis. These enzymes catalyze the transfer of various sugars onto the growing LPS chain during its biosynthesis.
COG3306 COG3306 4.49e-14 7 257 6 250
Glycosyltransferase involved in LPS biosynthesis, GR25 family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Created with Snap132740546881951091221361501631771912042182322452591273QXW98986.1|GT251273ATF62810.1|GT251273BAI65433.1|GT251273BAI65432.1|GT251273ATF62809.1|GT25
Hit ID E-Value Query Start Query End Hit Start Hit End
QXW98986.1 2.93e-193 1 273 1 273
ATF62810.1 8.39e-193 1 273 1 273
BAI65433.1 7.58e-192 1 273 61 333
BAI65432.1 1.84e-141 1 273 1 273
ATF62809.1 1.06e-140 1 273 1 273

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004886_00173.