logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000445_00240

You are here: Home > Sequence: MGYG000000445_00240

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; RF32; CAG-239; RUG410;
CAZyme ID MGYG000000445_00240
CAZy Family GT30
CAZyme Description 3-deoxy-D-manno-octulosonic acid transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
425 MGYG000000445_5|CGC1 48640.36 8.0567
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000445 1525621 MAG Sweden Europe
Gene Location Start: 36383;  End: 37660  Strand: -

Full Sequence      Download help

MFIGIYNTLV  RTLYPIVIRR  YIEKRKKMGK  EDVKRFNERV  GRPTKTRPDG  RLIWLHGASV60
GESISMLPLI  NRLLEIYPDA  HVMVTTGTTT  SAEVMAKRLP  ERAFHQYLPI  DNPVFAARFV120
RHWQPTIALW  FESEFWPAML  STIKRRNIPL  ILINGRISNK  SFKRWQQFDF  VIKELLDCFT180
ACLGQSEEDA  YRLRALGAKD  AMCLGNLKYA  GLPIPVDAEK  KKDIQDEIGE  RPVWLVSSTH240
SDEESKIGRY  IKELIAKHEG  LLTIIAPRHP  NRGVEIKELL  QEKYQLKTAL  RSANEKIMPE300
TEVYIADTIG  EMGIWYELCP  IVFIGGSLVP  HGGQNFMEPS  RCRDAVIVGP  HMHNFTDAMN360
RAKRADGVIQ  IDETIDLIDM  VDQLLSNKEL  LEAKRSLAYN  WATSEAKVLD  GIAEKIQGYM420
ENENT425

Enzyme Prediction      help

No EC number prediction in MGYG000000445_00240.

CAZyme Signature Domains help

Created with Snap2142638510612714817019121223325527629731834036138240334209GT30
Family Start End Evalue family coverage
GT30 34 209 2.4e-62 0.9774011299435028

CDD Domains      download full data without filtering help

Created with Snap214263851061271481701912122332552762973183403613824031421PRK057496395KdtA38210Glycos_transf_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05749 PRK05749 1.15e-148 1 421 1 422
3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
COG1519 KdtA 3.74e-143 6 395 5 394
3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis].
pfam04413 Glycos_transf_N 2.24e-75 38 210 2 175
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.

CAZyme Hits      help

Created with Snap214263851061271481701912122332552762973183403613824031421CCQ74891.1|GT306410AUG51867.1|GT304422AVM76567.1|GT304422AVM72664.1|GT304422CDK97342.1|GT30
Hit ID E-Value Query Start Query End Hit Start Hit End
CCQ74891.1 3.38e-136 1 421 1 419
AUG51867.1 6.19e-121 6 410 7 409
AVM76567.1 1.09e-119 4 422 4 416
AVM72664.1 1.09e-119 4 422 4 416
CDK97342.1 1.55e-119 4 422 4 416

PDB Hits      download full data without filtering help

Created with Snap21426385106127148170191212233255276297318340361382403533942XCI_A2313924BFC_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2XCI_A 2.26e-26 53 394 43 353
Membrane-embeddedmonofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCU_A Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus]
4BFC_A 3.26e-22 231 392 42 203
ChainA, 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE [Acinetobacter baumannii]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2142638510612714817019121223325527629731834036138240352420sp|Q4UND5|KDTA_RICFE5392sp|Q8VZA5|KDTA_ARATH51410sp|Q92JE9|KDTA_RICCN52420sp|Q68XV7|KDTA_RICTY28410sp|Q1RGU8|KDTA_RICBR
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q4UND5 1.56e-73 52 420 97 464
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=waaA PE=3 SV=1
Q8VZA5 2.56e-70 5 392 10 406
Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KDTA PE=2 SV=1
Q92JE9 1.55e-69 51 410 96 454
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=waaA PE=3 SV=1
Q68XV7 3.14e-68 52 420 94 461
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=waaA PE=3 SV=1
Q1RGU8 1.10e-67 28 410 26 407
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=waaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000023 0.000017 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000445_00240.