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CAZyme Information: MGYG000000793_00665

You are here: Home > Sequence: MGYG000000793_00665

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Succinivibrio sp900548485
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Succinivibrionaceae; Succinivibrio; Succinivibrio sp900548485
CAZyme ID MGYG000000793_00665
CAZy Family GT30
CAZyme Description 3-deoxy-D-manno-octulosonic acid transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
426 MGYG000000793_64|CGC1 48388.89 9.7882
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000793 1894833 MAG China Asia
Gene Location Start: 4364;  End: 5644  Strand: -

Full Sequence      Download help

MHFSSKIVFF  LYKFLTLILA  PVGVAFLCYK  KRLDPPYGKR  VFELLGFYPY  KLKNCIWFHA60
ASVGEINSLK  PLILKFQKVN  PNKTILITTM  TTTGGIAASN  IPNVHTFFMP  LDSPCVIKRF120
FNNFKPKFLF  IVDTELWPNM  LQGALKNKCK  VIIVNGRMQE  KNCQKYLKFK  NLVKDIIATP180
LYKVICISKE  DAQRFERIGI  DTNKIKVAGN  IKYDLNLNFE  PFHKGRKIKA  TFNGMVLCCA240
STHDGEESIC  LEVFKALKTK  IPSLKLVAVP  RHKTGVDLFE  KKLSNQNLSY  IKKSQIKNSL300
EYQNNEIILG  DTMGEMSFYF  GLSDLVFMGG  SFVPIGGHNP  LEPAYFSMPT  ITGPDYHNFK360
DQFKMLITQE  GAFEVQNQSE  FITKSLELLR  SPDKIKLSGE  HALEILNLGR  GSTDKILKEI420
AEDLSA426

Enzyme Prediction      help

No EC number prediction in MGYG000000793_00665.

CAZyme Signature Domains help

Created with Snap2142638510612714917019121323425527629831934036238340442215GT30
Family Start End Evalue family coverage
GT30 42 215 6.3e-54 0.9717514124293786

CDD Domains      download full data without filtering help

Created with Snap2142638510612714917019121323425527629831934036238340410424PRK057499422KdtA42215Glycos_transf_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05749 PRK05749 7.19e-132 10 424 4 421
3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
COG1519 KdtA 5.58e-120 9 422 2 417
3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis].
pfam04413 Glycos_transf_N 4.08e-48 42 215 1 176
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.

CAZyme Hits      help

Created with Snap2142638510612714917019121323425527629831934036238340410424AUD79454.1|GT3011422ACQ91766.1|GT3011417AHN27034.1|GT3011420QFT34959.1|GT3011420QGN68360.1|GT30
Hit ID E-Value Query Start Query End Hit Start Hit End
AUD79454.1 3.13e-83 10 424 4 415
ACQ91766.1 2.11e-79 11 422 21 432
AHN27034.1 4.67e-78 11 417 4 413
QFT34959.1 5.29e-77 11 420 5 419
QGN68360.1 5.29e-77 11 420 5 419

PDB Hits      download full data without filtering help

Created with Snap21426385106127149170191213234255276298319340362383404423972XCI_A2334154BFC_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2XCI_A 1.47e-44 42 397 24 352
Membrane-embeddedmonofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCU_A Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus]
4BFC_A 4.01e-18 233 415 41 222
ChainA, 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE [Acinetobacter baumannii]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2142638510612714917019121323425527629831934036238340410417sp|P44806|KDTA_HAEIN11418sp|P0AC75|KDTA_ECOLI11418sp|P0AC77|KDTA_ECO5711418sp|P0AC76|KDTA_ECOL630391sp|Q8R6G8|TRMB_FUSNN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P44806 1.53e-74 10 417 4 416
3-deoxy-D-manno-octulosonic acid transferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=waaA PE=1 SV=1
P0AC75 1.72e-64 11 418 5 414
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli (strain K12) OX=83333 GN=waaA PE=1 SV=1
P0AC77 1.72e-64 11 418 5 414
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli O157:H7 OX=83334 GN=waaA PE=3 SV=1
P0AC76 1.72e-64 11 418 5 414
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=waaA PE=3 SV=1
Q8R6G8 6.53e-52 30 391 18 377
Bifunctional glycosyltransferase/methyltransferase OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355) OX=190304 GN=trmB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999570 0.000457 0.000002 0.000001 0.000001 0.000003

TMHMM  Annotations      download full data without filtering help

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