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CAZyme Information: MGYG000002486_00455

You are here: Home > Sequence: MGYG000002486_00455

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusobacterium_A varium
Lineage Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium_A; Fusobacterium_A varium
CAZyme ID MGYG000002486_00455
CAZy Family GT30
CAZyme Description 3-deoxy-D-manno-octulosonic acid transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
413 MGYG000002486_1|CGC4 48282.69 8.4913
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002486 3346458 Isolate not provided not provided
Gene Location Start: 514141;  End: 515382  Strand: -

Full Sequence      Download help

MLYNIIRILI  MPFLYMYMLI  NKEKKEFFLK  RINQNLDVLK  KEEYIWVHCS  SVGEVNLSEA60
LVKKILIERE  ERILLTVMTD  TGMATAKDKY  KNNNRVDILY  FPLDEKKVIK  DILERIKLKI120
LILIETEIWP  NLIIECHKKG  KVIIVNGRIS  DRSFGRYEKL  SFYLKKLFKD  IDGFYMQSKL180
DSERIIKIGA  EDDKVETSGN  LKFDIDLEVF  DEKTKEELKK  SLGVCGRKIF  IAGSTRTGEN240
EIILEVFKKL  TDTLLILVPR  HIERVPVIEE  LIKKEKLSYR  KYSKIDSDNF  EKTDIILVDK300
IGVLRKLYSV  ADIVFVGGTL  VNIGGHSLLE  PLFYGKTPIF  GPYLQNVKDI  SKEILRKNIG360
YKVENIEEFV  ETINKIEENS  DIYKKNIDAF  FEENNRTADK  ILKKIDKLLE  VED413

Enzyme Prediction      help

No EC number prediction in MGYG000002486_00455.

CAZyme Signature Domains help

Created with Snap2041618210312314416518520622724726828930933035137139239205GT30
Family Start End Evalue family coverage
GT30 39 205 1e-53 0.9378531073446328

CDD Domains      download full data without filtering help

Created with Snap204161821031231441651852062272472682893093303513713922409KdtA2410PRK0574940205Glycos_transf_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1519 KdtA 4.00e-127 2 409 4 419
3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis].
PRK05749 PRK05749 1.71e-123 2 410 5 422
3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
pfam04413 Glycos_transf_N 2.14e-64 40 205 11 176
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.

CAZyme Hits      help

Created with Snap204161821031231441651852062272472682893093303513713921413VEH37976.1|GT301413AVQ30108.1|GT301413SQJ00086.1|GT301413AVQ28289.1|GT301413BBA52523.1|GT30
Hit ID E-Value Query Start Query End Hit Start Hit End
VEH37976.1 1.87e-287 1 413 1 413
AVQ30108.1 1.87e-287 1 413 1 413
SQJ00086.1 8.74e-254 1 413 1 413
AVQ28289.1 8.74e-254 1 413 1 413
BBA52523.1 1.04e-238 1 413 1 413

PDB Hits      download full data without filtering help

Created with Snap20416182103123144165185206227247268289309330351371392453762XCI_A2273584BFC_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2XCI_A 8.13e-44 45 376 43 343
Membrane-embeddedmonofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCU_A Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus]
4BFC_A 2.15e-08 227 358 42 177
ChainA, 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE [Acinetobacter baumannii]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2041618210312314416518520622724726828930933035137139222404sp|Q8R6G8|TRMB_FUSNN46360sp|F0T4D1|KDTA_CHLP645355sp|P44806|KDTA_HAEIN45376sp|O66663|KDTA_AQUAE2354sp|P0AC77|KDTA_ECO57
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8R6G8 1.11e-140 22 404 18 402
Bifunctional glycosyltransferase/methyltransferase OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355) OX=190304 GN=trmB PE=3 SV=1
F0T4D1 2.04e-44 46 360 62 377
3-deoxy-D-manno-octulosonic acid transferase OS=Chlamydophila psittaci (strain ATCC VR-125 / 6BC) OX=331636 GN=waaA PE=1 SV=1
P44806 2.55e-43 45 355 53 365
3-deoxy-D-manno-octulosonic acid transferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=waaA PE=1 SV=1
O66663 2.77e-43 45 376 22 322
3-deoxy-D-manno-octulosonic acid transferase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=kdtA PE=1 SV=1
P0AC77 6.69e-41 2 354 5 362
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli O157:H7 OX=83334 GN=waaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.998586 0.001305 0.000118 0.000002 0.000001 0.000006

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002486_00455.