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CAZyme Information: MGYG000003318_00480

You are here: Home > Sequence: MGYG000003318_00480

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Duodenibacillus massiliensis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Duodenibacillus; Duodenibacillus massiliensis
CAZyme ID MGYG000003318_00480
CAZy Family GT30
CAZyme Description 3-deoxy-D-manno-octulosonic acid transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
427 46706.38 9.7089
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003318 2001584 MAG Estonia Europe
Gene Location Start: 1691;  End: 2974  Strand: +

Full Sequence      Download help

MTLVTPRIYG  LLTSLCVPLA  KLYLKKRAKK  QPDYLLNWDE  RFARKPFPSP  VKPRLWVHAV60
SVGETNAAAP  LIEELVKRFG  DIEVLLTCMT  PTGRDAGLKL  AKRFAGRVTQ  CYLPYDVPAY120
ARRFLDETRP  RLAVFMETEV  WPNMLAEIHR  RGIPVVLANA  RESEKSLKKA  LRFEAVMRPA180
FASFDAVLAQ  SKADAARFEA  LGAKNITVCG  SLKFEVREDP  GQTRLARDFK  AKAGRPVVLI240
ASTREGEEAM  FAPLLRCFAG  KATVLLVPRH  PQRFNEVAQL  LEAAGLDVVR  RSACPSLEAL300
DARHDVILGD  SMGEMSFYCA  AADVCLMGGS  FGNTGCQNLI  EPAAAGSPVI  LGPSTYNFAQ360
IAADALRMGA  AFAVKDAREG  ITRALELVDN  AALRSLASQR  ALTFAKTYTG  AVGKMADKAE420
ELWKKSA427

Enzyme Prediction      help

EC 2.4.99.-

CAZyme Signature Domains help

Created with Snap2142648510612814917019221323425627729832034136238440537216GT30
Family Start End Evalue family coverage
GT30 37 216 2.7e-67 0.9830508474576272

CDD Domains      download full data without filtering help

Created with Snap214264851061281491701922132342562772983203413623844057412PRK057499411KdtA39216Glycos_transf_N63203Glyco_trans_4_4
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05749 PRK05749 1.93e-158 7 412 4 410
3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
COG1519 KdtA 1.04e-134 9 411 5 407
3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis].
pfam04413 Glycos_transf_N 2.66e-79 39 216 1 176
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.
pfam13579 Glyco_trans_4_4 7.19e-05 63 203 2 147
Glycosyl transferase 4-like domain.

CAZyme Hits      help

Created with Snap214264851061281491701922132342562772983203413623844054423QDA54730.1|GT3017423BBF22154.1|GT304423QQS89703.1|GT308414ANU66484.1|GT308414QQQ97632.1|GT30
Hit ID E-Value Query Start Query End Hit Start Hit End
QDA54730.1 1.94e-140 4 423 3 426
BBF22154.1 5.76e-129 17 423 4 414
QQS89703.1 1.38e-127 4 423 3 426
ANU66484.1 2.30e-110 8 414 7 422
QQQ97632.1 2.30e-110 8 414 7 422

PDB Hits      download full data without filtering help

Created with Snap21426485106128149170192213234256277298320341362384405403882XCI_A2353794BFC_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2XCI_A 8.49e-30 40 388 28 344
Membrane-embeddedmonofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCU_A Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus]
4BFC_A 2.24e-16 235 379 42 187
ChainA, 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE [Acinetobacter baumannii]

Swiss-Prot Hits      download full data without filtering help

Created with Snap214264851061281491701922132342562772983203413623844058421sp|Q45374|KDTA_BORPT8415sp|P0AC75|KDTA_ECOLI8415sp|P0AC77|KDTA_ECO578415sp|P0AC76|KDTA_ECOL69390sp|P44806|KDTA_HAEIN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q45374 6.28e-94 8 421 5 425
3-deoxy-D-manno-octulosonic acid transferase OS=Bordetella pertussis OX=520 GN=waaA PE=1 SV=1
P0AC75 2.14e-70 8 415 5 412
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli (strain K12) OX=83333 GN=waaA PE=1 SV=1
P0AC77 2.14e-70 8 415 5 412
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli O157:H7 OX=83334 GN=waaA PE=3 SV=1
P0AC76 2.14e-70 8 415 5 412
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=waaA PE=3 SV=1
P44806 6.19e-56 9 390 6 389
3-deoxy-D-manno-octulosonic acid transferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=waaA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999968 0.000044 0.000012 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003318_00480.