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CAZyme Information: MGYG000003761_00556

You are here: Home > Sequence: MGYG000003761_00556

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Stenotrophomonas maltophilia_S
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia_S
CAZyme ID MGYG000003761_00556
CAZy Family GT30
CAZyme Description 3-deoxy-D-manno-octulosonic acid transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
432 MGYG000003761_8|CGC1 48340.52 8.4862
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003761 4722963 MAG Canada North America
Gene Location Start: 46494;  End: 47792  Strand: -

Full Sequence      Download help

MRKDPVEWIL  RGLYSVVLYI  LLPITVYHLV  WRGFRVREYF  RRWDERYASY  PQPTGQPRVW60
LHAVSVGEVN  AAAPLVNALR  QQRPDIRWVI  TTITPTGSER  VRALWGDALD  HVYLPYDVPG120
SVNRFLGHFQ  PSLALILETE  LWPNMLFGCR  DRSIPVYILN  ARLSARSLRG  YRLLAALIRR180
ALRTVTCVAA  QSQDDAERFV  QLGAEPGQVQ  ALGNLKFDIT  TPDVQGFVEQ  FHARVAAARP240
VWIAASTHDG  EEQAVIDLHR  RLRQQHPDLL  LLWAPRHPER  FPKVEALARE  QGWSVATRRV300
DQWPHAATDV  FVIDTLGELM  PFYACAQVAF  VGGSLQAIGG  HNLLEPAAMG  TAAVTGPHLH360
NFAEISRRMR  EAGALLIGED  AQAVGDLLQH  LLGDAQARED  MARAGCTLVS  NGRGALQRTL420
ALVAPHLPPP  RE432

Enzyme Prediction      help

No EC number prediction in MGYG000003761_00556.

CAZyme Signature Domains help

Created with Snap2143648610812915117219421623725928030232434536738841042219GT30
Family Start End Evalue family coverage
GT30 42 219 2.8e-71 0.9830508474576272

CDD Domains      download full data without filtering help

Created with Snap2143648610812915117219421623725928030232434536738841010427KdtA9431PRK0574944219Glycos_transf_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1519 KdtA 0.0 10 427 1 419
3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis].
PRK05749 PRK05749 0.0 9 431 1 425
3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
pfam04413 Glycos_transf_N 1.43e-84 44 219 1 176
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.

CAZyme Hits      help

Created with Snap214364861081291511721942162372592803023243453673884101432AUI08936.1|GT301432QCZ98345.1|GT301432AEM52696.1|GT301432ARZ75869.1|GT301432QDL29400.1|GT30
Hit ID E-Value Query Start Query End Hit Start Hit End
AUI08936.1 0.0 1 432 1 432
QCZ98345.1 0.0 1 432 1 432
AEM52696.1 0.0 1 432 1 432
ARZ75869.1 0.0 1 432 1 432
QDL29400.1 0.0 1 432 1 432

PDB Hits      download full data without filtering help

Created with Snap21436486108129151172194216237259280302324345367388410593742XCI_A2394274BFC_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2XCI_A 2.09e-32 59 374 43 326
Membrane-embeddedmonofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCU_A Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus]
4BFC_A 2.68e-29 239 427 42 231
ChainA, 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE [Acinetobacter baumannii]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2143648610812915117219421623725928030232434536738841010429sp|P0AC77|KDTA_ECO5710429sp|P0AC76|KDTA_ECOL610429sp|P0AC75|KDTA_ECOLI11427sp|P44806|KDTA_HAEIN11420sp|Q45374|KDTA_BORPT
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0AC77 9.38e-125 10 429 2 422
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli O157:H7 OX=83334 GN=waaA PE=3 SV=1
P0AC76 9.38e-125 10 429 2 422
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=waaA PE=3 SV=1
P0AC75 9.38e-125 10 429 2 422
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli (strain K12) OX=83333 GN=waaA PE=1 SV=1
P44806 6.38e-98 11 427 3 423
3-deoxy-D-manno-octulosonic acid transferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=waaA PE=1 SV=1
Q45374 2.07e-69 11 420 3 420
3-deoxy-D-manno-octulosonic acid transferase OS=Bordetella pertussis OX=520 GN=waaA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000030 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
12 31