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CAZyme Information: MGYG000000898_00281

You are here: Home > Sequence: MGYG000000898_00281

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA5394 sp900542615
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; CAG-138; UBA5394; UBA5394 sp900542615
CAZyme ID MGYG000000898_00281
CAZy Family GT39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1263 MGYG000000898_5|CGC1 139420.33 6.6223
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000898 2143386 MAG Denmark Europe
Gene Location Start: 18034;  End: 21825  Strand: -

Full Sequence      Download help

MHKFKALLLA  CALLLLPASA  LADTPVTLSN  GDFEQIGIAD  GLPLDWYAEA  WITGEDAYRI60
QRLTDENGAP  CVQIAAPEEN  DVRLCQTIPV  AENSYYRISC  ELHTQDVSGG  GGANVSVVGS120
LAASEPVVGT  SNGWQQVELV  GKTGADQKEM  AICIRLGGYG  ALCSGTAWFR  NVEVVQLDSL180
PVGTVAADFG  QAPTSQSSEA  THNVNELHSG  AMLLVTVACA  VAGLWLYIRW  IRLKQPEDPQ240
PKPSPWPKLA  AILAGAFVLR  LALSLVFYGH  STDMGCFLAW  GNAMAEGGPG  AFYTSGFFAD300
YPPGYMYVLW  LTGGIAKLLG  LSYGGNGHVL  LTKMPVILCD  LAAAYVVFRM  ADKRLPRRIS360
LLLCGLVALN  PAMAFLSGGW  GQIDQVLTLA  LLLVVWLLTE  NRLEWAGLAY  GIAILIKPQA420
LMAGPLFAGV  YFAKIHDQGA  KAALRTLAAV  ALAVGSILLL  CLPFGGGQGT  VEVEFFGLSF480
QGPWFLEKLL  GTATSYPYAS  IEAFNLFALL  GGNWQPVDAP  FLFSITYGQW  GTACMVLCVL540
AALWMYIRGR  KEKGCLPLSL  AFLLAGLFTL  GQYMHERYLF  PVLLLLMVSF  IAYEDRRLFL600
CYVGFTCSLL  LNSLAAFMVV  KDTALRGAEY  DCITVLGSMI  TVLTFAYFAW  VCWDLLLRKR660
RSPAFAGDRR  AEEIQPSLSN  KKKPEESCRF  TARDRLLCGT  LTLVYGVIAI  INLGTTQAPE720
TVWQASAGQG  AVLELEQEAQ  LSCIRVFGGL  DTGTISIAGD  DGSTLKYTED  NGDMFRWVDI780
GGDGWQTKTL  TIQVQQGTVW  FNEIACFDQA  GNYIPITGWE  ATGDGAPDAG  LLCDEPDQVP840
AYPSSKNGMY  FDELYHARTA  YEHLHGLTPY  ENSHPPLGKI  FIMAGIAVFG  MNAFGWRIVG900
TLFGIGMVPI  LYLFAKRLFG  KSEYALLAAG  LFAFDFMHYT  QTRIATIDVY  GVFFILLMYY960
FMYRYYTMNF  FTDGLFATLK  PLAWAGVFFG  LGVACKWICI  YAGGGLAVIF  FTSLAQRYLE1020
YRRNKQSRDV  KKRAQVARFW  RQAIITLLWC  CLFYILVPAS  IYLASYLPYV  WSEAQYDLKG1080
IWGVQEFMFN  YHSTLTASHP  YESPWWQWPL  DIRPVWYYVG  YDGMPANYAA  TISAFGNPAV1140
WWLCSLGGAG  LAIRLLMKRI  RYEKGMFVLL  AGVCANYLPW  VLVTRCTFAY  HFFATVPFLI1200
LCTVYLVKRG  EEKKGWPGWV  KWAWLGAAVV  LFGAFYPVLS  GTPAPASYIH  ALEWMPTWTF1260
LGY1263

Enzyme Prediction      help

No EC number prediction in MGYG000000898_00281.

CAZyme Signature Domains help

Created with Snap6312618925231537844250556863169475782088494710101073113611998461069GT39
Family Start End Evalue family coverage
GT39 846 1069 1.1e-53 0.9192825112107623

CDD Domains      download full data without filtering help

Created with Snap63126189252315378442505568631694757820884947101010731136119910821256PMT_4TMC8511260PMT18501071PMT8701208COG43468731019PMT_2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16192 PMT_4TMC 2.38e-24 1082 1256 4 198
C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes.
COG1928 PMT1 2.92e-20 851 1260 50 695
Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].
pfam02366 PMT 7.34e-17 850 1071 22 242
Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.
COG4346 COG4346 4.04e-16 870 1208 132 407
Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones].
pfam13231 PMT_2 1.82e-15 873 1019 1 138
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.

CAZyme Hits      help

Created with Snap63126189252315378442505568631694757820884947101010731136119931260QWU18200.1|CBM0|GT3931260AHV95529.1|CBM0|GT3931260BCG57259.1|CBM0|GT3931260AIQ11159.1|CBM0|GT3971260QSF45552.1|GT39
Hit ID E-Value Query Start Query End Hit Start Hit End
QWU18200.1 2.07e-263 3 1260 10 1273
AHV95529.1 1.97e-260 3 1260 9 1273
BCG57259.1 2.03e-260 3 1260 9 1274
AIQ11159.1 1.70e-258 3 1260 10 1273
QSF45552.1 3.72e-257 7 1260 11 1273

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap6312618925231537844250556863169475782088494710101073113611998511258sp|P9WN04|PMT_MYCTO8511258sp|P9WN05|PMT_MYCTU8431258sp|L8F4Z2|PMT_MYCSE8741258sp|Q8NRZ6|PMT_CORGL
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P9WN04 9.98e-29 851 1258 73 521
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2
P9WN05 9.98e-29 851 1258 73 521
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2
L8F4Z2 2.28e-27 843 1258 59 515
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1
Q8NRZ6 1.99e-17 874 1258 99 519
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=pmt PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000222 0.999027 0.000233 0.000163 0.000163 0.000151

TMHMM  Annotations      download full data without filtering help

start end
209 231
246 268
289 311
326 348
361 383
411 433
446 468
525 547
554 573
578 593
598 620
635 657
696 718
893 915
922 939
944 963
970 992
997 1019
1039 1061
1131 1153
1166 1183
1188 1207
1220 1242