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CAZyme Information: MGYG000002411_00275

You are here: Home > Sequence: MGYG000002411_00275

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Christensenella sp001678845
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Christensenellaceae; Christensenella; Christensenella sp001678845
CAZyme ID MGYG000002411_00275
CAZy Family GT39
CAZyme Description Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1085 MGYG000002411_1|CGC2 122957.62 7.2585
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002411 3026585 Isolate China Asia
Gene Location Start: 274562;  End: 277819  Strand: -

Full Sequence      Download help

MEAQNELIVW  FTVLGIIFLF  AIAYLYYGRK  KRNPFQKQVP  ADTLFIVFVL  AAIVIRLALA60
YNMPGYKTDL  DCFKAWANYS  YTGGLDNFYT  GGFFADYPPV  YIYVLYFFGF  LQNTFSMNLG120
GPAFALMIHL  PAIICDILAA  YIVYRLAQEK  FRPNVALLLS  ALVLFNPAVI  FNSAIWGQVD180
IIITLMMVLV  IYLLVKNRPI  WASVAFIVAF  LLKPQAIMIF  PILAFVLIRN  VIVSENRKKD240
VLNLLISIGV  MVGLFFLIPL  PFAGSQEPLW  LVKQFLSTVG  QYDQASLNAF  NLFAMLGQNF300
VPVSNVIFLG  LPANVWGFIL  IALVCAYSLF  LFLKSPKKEF  LFALAAFIIM  GVFALGHGMH360
DRYLYPVPIL  LLFAFLFMKD  KRLIWPTVLV  SIVLLLNQAL  SLYYYQVLIP  VAWTVSVSAV420
SLAVFIYTGY  VITCLALGPV  REKAEDSGPS  GIETAGEPAA  GETYEKPPAQ  LRLENFQEKK480
TLNKKDGLFM  LVISAIYAVV  AFTNLGAFQI  PETPVQLENE  SVIVELPGEE  QISTVEYYAG540
YGEGNFRFLY  SEDGVSYSPI  ALEKSGTTVS  EIEHKFANMY  KWQIYTTDVD  AKYIKIEPLS600
GSLPVLEVAF  KDAQGALIEP  QSVAPASTQV  LFDEQALVPE  ESTYMTDFYF  DEIYHVRTAY660
ENIHGIEPYE  ITHPPLGKLI  LACGIQLFGM  NPFGWRFMGT  LTGVLMLPVL  YIFAKMLFKK720
SKYAAIATIL  FAVDFMHFAQ  TRIGTIDSYS  ILWIMLMYLF  MYQFTQSNFN  RQKISKTLVP780
LALSGLFFGI  GAATKWLCIY  AGAGLAVIFF  MTLYKRYQEY  RFAKEKLLAH  ETGEASDAGG840
TALYRSIVQK  YKTNVALILC  WCVLFFIVVP  AVIYVASYYP  YTIVTQGEAY  QFIVPGDLKE900
HHSIIGNQFY  MLNYHSTLNP  DHVHPFSSMW  YSWPVDVRPV  LFFNGHNDLN  HTTSTLSTMG960
NPLIWWAGVV  ACVWLIIDSA  RGKHRHHGVT  FTAIAALSQF  VPWWFVTREV  FIYHYFATVP1020
FLIILIVYWL  RNIEKDFKYG  KQFMWGFVIA  CGVMFAVFYP  VITGIPFDTN  YVTALRWLPS1080
WPFYG1085

Enzyme Prediction      help

No EC number prediction in MGYG000002411_00275.

CAZyme Signature Domains help

Created with Snap541081622172713253794344885425966517057598138689229761030645881GT39
Family Start End Evalue family coverage
GT39 645 881 8.7e-52 0.9192825112107623

CDD Domains      download full data without filtering help

Created with Snap54108162217271325379434488542596651705759813868922976103073384COG55429081079PMT_4TMC9051084PMT1673816PMT_2673809PMT
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5542 COG5542 1.10e-23 73 384 71 369
Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism].
pfam16192 PMT_4TMC 1.29e-17 908 1079 7 198
C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes.
COG1928 PMT1 4.16e-14 905 1084 502 696
Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].
pfam13231 PMT_2 7.68e-10 673 816 2 136
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
pfam02366 PMT 8.94e-09 673 809 45 198
Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.

CAZyme Hits      help

Created with Snap54108162217271325379434488542596651705759813868922976103011085AYH39702.1|GT39131084QWT55655.1|GT39441084QAV17438.1|GT39201083AIQ39188.1|CBM0|GT39201083QUL55595.1|CBM16|GT39
Hit ID E-Value Query Start Query End Hit Start Hit End
AYH39702.1 0.0 1 1085 1 1076
QWT55655.1 1.06e-226 13 1084 202 1254
QAV17438.1 1.70e-211 44 1084 17 1090
AIQ39188.1 1.56e-200 20 1083 234 1279
QUL55595.1 3.47e-198 20 1083 233 1278

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap5410816221727132537943448854259665170575981386892297610306501081sp|L8F4Z2|PMT_MYCSE6501081sp|P9WN04|PMT_MYCTO6501081sp|P9WN05|PMT_MYCTU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
L8F4Z2 1.04e-23 650 1081 67 515
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1
P9WN04 4.14e-19 650 1081 73 521
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2
P9WN05 4.14e-19 650 1081 73 521
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
7 29
44 66
87 109
124 143
155 177
206 228
241 263
311 333
340 359
363 378
383 405
409 431
488 510
692 714
743 765
792 814
855 877
955 977
989 1006
1011 1030
1043 1065