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CAZyme Information: MGYG000001317_00693

You are here: Home > Sequence: MGYG000001317_00693

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter portucalensis_A
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter portucalensis_A
CAZyme ID MGYG000001317_00693
CAZy Family GT51
CAZyme Description Penicillin-binding protein 1A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
850 93290.81 6.782
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001317 5150259 Isolate not provided not provided
Gene Location Start: 69385;  End: 71937  Strand: +

Full Sequence      Download help

MKFVKYLLIL  AVCCILLGAG  SIYGLYRYIE  PQLPDVATLK  DVRLQIPMQV  YSADGELIAQ60
YGEKRRIPVT  LAQMPPEMVK  AFIATEDSRF  YEHHGVDPVG  IFRAASVALF  SGHASQGAST120
ITQQLARNFF  LSPERTLMRK  IKEVFLAIRI  EQLLSKDEIL  ELYLNKIYLG  YRAYGVGAAA180
QVYFGKTVDQ  LSLSEIAVIA  GLPKAPSTFN  PLYSIDRATA  RRNVVLSRML  SENYITQAQY240
DQARGEAIDA  NYHAPEIAFS  APYLSEMVRQ  EMYNRYGEKA  YEDGYRITTT  ITRKVQQAAQ300
QAVRNNVMDY  DMRHGYRGPS  NVLWKVGESS  WDSKKITDTL  KALPTYGPLL  PAVVTSANPQ360
EAIAALADGT  SVSLRMDGMR  WARPYRSDTQ  QGPTPRKVTD  VVQTGQQIWV  RQVGDAWWLA420
QVPDVNSALV  SINPQNGAVL  ALVGGFDFNQ  SKFNRATQAL  RQVGSNIKPF  LYTAAMDKGL480
TLASMLNDVP  ISRWDAGAGS  DWQPKNSPPQ  YAGPIRLRQG  LGQSKNVVMV  RAMRAMGVDY540
AAEYLQRFGF  PAQNIVHTES  LALGSASFTP  MQVARGYAVM  ANGGFLVDPY  FISKIESDQG600
GVIFEAKPKI  ACPDCDIPVI  YGDTQKSNVL  ENTNVEDVAV  SQEQQNAAVP  MPQLEQANQA660
LVAQSGTQEY  APHVINTPLA  FLIKSALNTN  IFGEPGWMGT  GWRAGRDLKR  HDIGGKTGTT720
NSSKDAWFSG  YGPGVVTSVW  IGFDDHRRDL  GHTTASGAIK  DQISGYEGGA  KSAQPAWDAY780
MKSVLEGVPE  QPLTPPPGIV  TVNIDRSTGQ  LASGGNSREE  YFIEGTQPTQ  QAVHEVGTTI840
IDNGETHELF  850

Enzyme Prediction      help

EC 2.4.1.129

CAZyme Signature Domains help

Created with Snap428512717021225529734038242546751055259563768072276580754229GT51
Family Start End Evalue family coverage
GT51 54 229 4e-70 0.9887005649717514

CDD Domains      download full data without filtering help

Created with Snap42851271702122552973403824254675105525956376807227658071850mrcA1850MrcA65787PBP_1a_fam1838MrcB36830PBP_1b
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK11636 mrcA 0.0 1 850 1 850
penicillin-binding protein 1a; Provisional
COG5009 MrcA 0.0 1 850 2 797
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis].
TIGR02074 PBP_1a_fam 0.0 65 787 1 531
penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG0744 MrcB 1.66e-168 1 838 9 644
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
TIGR02071 PBP_1b 8.59e-112 36 830 114 728
penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]

CAZyme Hits      help

Created with Snap42851271702122552973403824254675105525956376807227658071850BBV28840.1|GT511850BBV33854.1|GT512850QET68344.1|GT512850AYL67984.1|GT512850AWS94852.1|GT51
Hit ID E-Value Query Start Query End Hit Start Hit End
BBV28840.1 0.0 1 850 1 850
BBV33854.1 0.0 1 850 1 850
QET68344.1 0.0 2 850 10 858
AYL67984.1 0.0 2 850 10 858
AWS94852.1 0.0 2 850 10 858

PDB Hits      download full data without filtering help

Created with Snap4285127170212255297340382425467510552595637680722765807308355U2G_A368364OON_A477893UDF_A552433NB6_A552432OQO_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5U2G_A 4.50e-280 30 835 4 807
2.6Angstrom Resolution Crystal Structure of Penicillin-Binding Protein 1A from Haemophilus influenzae [Haemophilus influenzae Rd KW20],5U2G_B 2.6 Angstrom Resolution Crystal Structure of Penicillin-Binding Protein 1A from Haemophilus influenzae [Haemophilus influenzae Rd KW20]
4OON_A 3.49e-208 36 836 9 774
Crystalstructure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid) [Pseudomonas aeruginosa PAO1]
3UDF_A 5.67e-180 47 789 20 720
ChainA, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDF_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii]
3NB6_A 1.35e-61 55 243 9 197
Crystalstructure of Aquifex aeolicus peptidoglycan glycosyltransferase in complex with Methylphosphoryl Neryl Moenomycin [Aquifex aeolicus]
2OQO_A 3.58e-61 55 243 9 197
Crystalstructure of a peptidoglycan glycosyltransferase from a class A PBP: insight into bacterial cell wall synthesis [Aquifex aeolicus VF5],3D3H_A Crystal structure of a complex of the peptidoglycan glycosyltransferase domain from Aquifex aeolicus and neryl moenomycin A [Aquifex aeolicus],3NB7_A Crystal structure of Aquifex Aeolicus Peptidoglycan Glycosyltransferase in complex with Decarboxylated Neryl Moenomycin [Aquifex aeolicus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap42851271702122552973403824254675105525956376807227658071850sp|P02918|PBPA_ECOLI1850sp|Q9KNU5|PBPA_VIBCH9836sp|P31776|PBPA_HAEIN1836sp|Q07806|PBPA_PSEAE16808sp|Q87AW7|PBPA_XYLFT
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P02918 0.0 1 850 1 850
Penicillin-binding protein 1A OS=Escherichia coli (strain K12) OX=83333 GN=mrcA PE=1 SV=1
Q9KNU5 7.92e-308 1 850 1 825
Penicillin-binding protein 1A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=mrcA PE=3 SV=2
P31776 1.57e-281 9 836 11 823
Penicillin-binding protein 1A OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=mrcA PE=1 SV=2
Q07806 2.79e-214 1 836 4 801
Penicillin-binding protein 1A OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=mrcA PE=1 SV=2
Q87AW7 3.43e-178 16 808 23 778
Penicillin-binding protein 1A OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) OX=183190 GN=mrcA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.997770 0.001495 0.000489 0.000016 0.000007 0.000260

TMHMM  Annotations      download full data without filtering help

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