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CAZyme Information: MGYG000001953_01485

You are here: Home > Sequence: MGYG000001953_01485

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Anaerovoracaceae; ;
CAZyme ID MGYG000001953_01485
CAZy Family GT51
CAZyme Description Monofunctional biosynthetic peptidoglycan transglycosylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
998 MGYG000001953_112|CGC1 109369.45 4.2586
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001953 2352119 MAG Denmark Europe
Gene Location Start: 1187;  End: 4183  Strand: +

Full Sequence      Download help

MRSDKRKEKK  KAKKHASTET  AVVNSDGTAS  RKKYRLNKKR  FFLFLLTLIL  IAIIGVAIYV60
GVIISQAPKI  DTDDIYTILT  ESTVIYDDDG  KEIDTVYTEA  NRENVEYKEL  PENLVNAFVA120
LEDKTFWDHH  GFNIVRIFGA  IKDSFTSGHI  SGTSTITQQL  ARNLFLKEKM  TEHTLERKII180
EAYYAIILEK  ELSKEEIMEA  YLNTVYLGYQ  SNGVQAASQA  YFSKDVQDLS  LAQCAALASL240
VQAPSDYQLV  ELVGNDDVST  KDTNIIKRTS  AGTYIANDAS  KNRRETCLKL  MKEQGYISQE300
EYDKAVSVSL  KDMLNPSYNS  SSTEASYFED  YVIEEVINDL  MEANDWDYNT  AWEKVYNGGV360
KIYSTLDSQA  QNVITTEFEN  DTNFPGVSIS  TDGNGNIVNK  YGQISLYAYS  NYFDDDGNFT420
FTNDEITRQD  DGSLIIKAGK  RLNIYDTEVN  GETDYSIEFK  NLYTMENGTL  YAISGGYINI480
PQQYKSKNKN  GNIVVSAEFF  EDEQYKDFFI  FNDDGTVTVP  SRSYTLNQKV  IQPQAAMTIV540
DNATGQIKAM  VGGRKTTGRQ  LYNRATNPRQ  PGSSIKPLSV  YAAAIQQSAD  EAANGQKHKF600
VDYNIDEQGA  DLYGNYLTAG  SIVIDEETTI  NGRVWPRNSG  GGYSGPQTMR  SALQLSINTC660
AVKILQQVGT  DYSADLVEKF  GITTLDREGS  TNDINLAALG  LGGMSSGVTT  LEMASAYTVF720
PNNGTRQETT  SYTKVVDTHG  NTLLDNSQTE  THEVLNSGVA  WIMADMLKSV  VTSGLGSPAA780
ISGVQVGGKT  GTTDDEYDIW  FDGFTPSYSA  SLWIGNDQNF  TLTSLSSYAA  RLWGRIMNQI840
DGAKTGSYKD  MPSNVISSGG  EYYISGTQGG  TGSLDDLEKE  VTICTDSGYL  ATPSCTHTET900
VTYSTYGDEA  EEIPEYYCYM  HNPDTEKYPI  SPDETLQPQD  PIKPPDEEDP  ETPPDEGGDG960
GGDNPNGGDE  GGDSGQGGGN  QGSGDGGNQG  GGNTPSTQ998

Enzyme Prediction      help

No EC number prediction in MGYG000001953_01485.

CAZyme Signature Domains help

Created with Snap499914919924929934939944949954859864869874879884889894889254GT51
Family Start End Evalue family coverage
GT51 89 254 1.3e-56 0.8983050847457628

CDD Domains      download full data without filtering help

Created with Snap4999149199249299349399449499548598648698748798848898948101840PBP_1a_fam82871MrcB55868MrcA85868mrcA89247Transgly
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02074 PBP_1a_fam 1.04e-154 101 840 1 528
penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG0744 MrcB 4.32e-146 82 871 55 625
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
COG5009 MrcA 9.92e-128 55 868 22 763
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis].
PRK11636 mrcA 9.38e-71 85 868 50 827
penicillin-binding protein 1a; Provisional
pfam00912 Transgly 3.52e-66 89 247 1 156
Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.

CAZyme Hits      help

Created with Snap499914919924929934939944949954859864869874879884889894815931AKT47092.1|GT5150867ASS40664.1|GT5120870ASS37973.1|GT5148870AVM47767.1|GT5143931QHI73342.1|GT51
Hit ID E-Value Query Start Query End Hit Start Hit End
AKT47092.1 0.0 15 931 4 922
ASS40664.1 0.0 50 867 76 892
ASS37973.1 1.71e-308 20 870 97 943
AVM47767.1 3.45e-305 48 870 122 943
QHI73342.1 8.58e-285 43 931 1 917

PDB Hits      download full data without filtering help

Created with Snap4999149199249299349399449499548598648698748798848898948658567U4H_A1058223UDF_A1888383ZG8_B858224OON_A858683DWK_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7U4H_A 6.64e-128 65 856 3 776
ChainA, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX],7U4H_B Chain B, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX]
3UDF_A 4.82e-54 105 822 42 694
ChainA, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDF_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii]
3ZG8_B 7.80e-54 188 838 3 458
CrystalStructure of Penicillin Binding Protein 4 from Listeria monocytogenes in the Ampicillin bound form [Listeria monocytogenes],3ZG9_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form [Listeria monocytogenes],3ZGA_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Carbenicillin bound form [Listeria monocytogenes]
4OON_A 1.52e-51 85 822 23 701
Crystalstructure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid) [Pseudomonas aeruginosa PAO1]
3DWK_A 6.62e-47 85 868 10 615
ChainA, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_B Chain B, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_C Chain C, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_D Chain D, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL]

Swiss-Prot Hits      download full data without filtering help

Created with Snap499914919924929934939944949954859864869874879884889894839876sp|Q97GR5|PBPA_CLOAB46858sp|A7GHV1|PBPA_CLOBL46858sp|A7FY32|PBPA_CLOB146858sp|A5I6G4|PBPA_CLOBH24837sp|Q8XJ01|PBPA_CLOPE
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q97GR5 1.93e-93 39 876 30 702
Penicillin-binding protein 1A OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=pbpA PE=3 SV=1
A7GHV1 3.89e-93 46 858 21 661
Penicillin-binding protein 1A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) OX=441772 GN=pbpA PE=3 SV=1
A7FY32 1.10e-92 46 858 21 661
Penicillin-binding protein 1A OS=Clostridium botulinum (strain ATCC 19397 / Type A) OX=441770 GN=pbpA PE=3 SV=1
A5I6G4 1.10e-92 46 858 21 661
Penicillin-binding protein 1A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) OX=441771 GN=pbpA PE=3 SV=1
Q8XJ01 8.46e-86 24 837 14 662
Penicillin-binding protein 1A OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=pbpA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999977 0.000032 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
41 63