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CAZyme Information: MGYG000001964_00202

You are here: Home > Sequence: MGYG000001964_00202

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Acetatifactor sp900772845
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Acetatifactor; Acetatifactor sp900772845
CAZyme ID MGYG000001964_00202
CAZy Family GT51
CAZyme Description Penicillin-binding protein 1A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
890 MGYG000001964_2|CGC1 97463.54 4.9186
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001964 3194803 MAG Denmark Europe
Gene Location Start: 60227;  End: 62899  Strand: -

Full Sequence      Download help

MDYGKKGVRA  KQKALNSKSQ  KWGRKIALTC  VKVLLIAIVG  IGICGAAAGI  GVFRGILSST60
PTIRLSDVVA  VGEATIVYDK  EGNEIDQYVS  TNSNRLSVGM  DEIPDYMGKA  FVAIEDERFY120
QHNGIDFKSI  LRAGYQFLKT  GGEEAQGAST  ITQQLLKNTV  FTDWTSEGKN  KIKKIKRKIQ180
EQYLALEITK  YYSKDEILLR  YMNAINLGQN  TLGVESASLR  YFGKHCSDLT  ISECAVIASI240
TQNPSKYNPI  RHPEENAKRR  KTCLTKMLEL  GFISQAQYDE  AVADTDAVYE  RIGLYDIDYQ300
EANATTGSYF  SDAVYEQVKQ  DLILSGYNEA  MAETLLTSGG  LRVESTLDPK  IQAILNEEYA360
DPANYPENVK  WYLNYALTII  SPDGTKNNFS  KENMMTWFKE  NQNKKFNLIF  SSQDDAYAAV420
ETYRSAMLAQ  LGVEDNADNY  EESITMTPQP  QSAMVIEEQN  TGHIVAMIGG  RGAKEGRRTL480
NRATSAKRLP  GSTFKVVASY  APALDSAGKT  LATVYNDAPF  NYADGTPVRN  WYKSGYRGIQ540
NIRSAIRDSL  NIIAVKNITV  ITPRLGYDYL  LNFGFTTLTD  GVQVGNEIKS  DVNQSLALGG600
LTYGVTPYEL  TAAYAAIANG  GTYVTPKLYT  RVTDSDGNVI  LDNTNPPTRQ  VIKETTAFLL660
TSAMQDVVTS  GTGGKVNFGG  MAIAGKTGTT  TGPTDAWFAG  YTPYYTAATW  TGYDNNVDLN720
SAEDGVSKTL  WRKVMKRVHE  DLPNTQFPVP  SGIVRVAVCS  QSGKLPIPGL  CDGCVYTEYF780
AEGTEPTESC  DVHYQGEICA  YDGLPASPDC  PFKYAGVATM  PLVEDPALQQ  GSTVIVNNPD840
GTQTVITPNT  RSQCEHDAAF  FANPDYEAVI  NQQQAEINAR  NAAAQPQTEE  890

Enzyme Prediction      help

No EC number prediction in MGYG000001964_00202.

CAZyme Signature Domains help

Created with Snap448913317822226731135640044548953457862366771275680184582267GT51
Family Start End Evalue family coverage
GT51 82 267 2.2e-60 0.9830508474576272

CDD Domains      download full data without filtering help

Created with Snap448913317822226731135640044548953457862366771275680184532748MrcB25793MrcA94741PBP_1a_fam31796mrcA95763PBP_1b
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0744 MrcB 3.62e-145 32 748 14 606
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
COG5009 MrcA 6.42e-144 25 793 3 771
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis].
TIGR02074 PBP_1a_fam 1.08e-141 94 741 1 531
penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
PRK11636 mrcA 2.44e-72 31 796 4 837
penicillin-binding protein 1a; Provisional
TIGR02071 PBP_1b 4.11e-69 95 763 147 705
penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]

CAZyme Hits      help

Created with Snap44891331782222673113564004454895345786236677127568018451885QNM01268.1|GT511886AOZ97241.1|GT511885ADL35192.1|GT511815AEN95629.1|GT511811CBL12211.1|GT51
Hit ID E-Value Query Start Query End Hit Start Hit End
QNM01268.1 0.0 1 885 1 885
AOZ97241.1 0.0 1 886 1 880
ADL35192.1 0.0 1 885 1 876
AEN95629.1 5.07e-258 1 815 1 806
CBL12211.1 7.85e-255 1 811 1 802

PDB Hits      download full data without filtering help

Created with Snap4489133178222267311356400445489534578623667712756801845737947U4H_A777874OON_A877433UDF_A1877143ZG8_B1877143ZG7_B
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7U4H_A 2.50e-88 73 794 19 815
ChainA, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX],7U4H_B Chain B, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX]
4OON_A 6.58e-68 77 787 23 770
Crystalstructure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid) [Pseudomonas aeruginosa PAO1]
3UDF_A 3.35e-56 87 743 29 720
ChainA, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDF_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii]
3ZG8_B 1.10e-51 187 714 2 433
CrystalStructure of Penicillin Binding Protein 4 from Listeria monocytogenes in the Ampicillin bound form [Listeria monocytogenes],3ZG9_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form [Listeria monocytogenes],3ZGA_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Carbenicillin bound form [Listeria monocytogenes]
3ZG7_B 1.74e-48 187 714 2 433
CrystalStructure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the apo form [Listeria monocytogenes]

Swiss-Prot Hits      download full data without filtering help

Created with Snap448913317822226731135640044548953457862366771275680184524811sp|A5I6G4|PBPA_CLOBH24811sp|A7FY32|PBPA_CLOB124811sp|A7GHV1|PBPA_CLOBL11802sp|Q0TNZ8|PBPA_CLOP111798sp|Q0SRL7|PBPA_CLOPS
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A5I6G4 2.43e-109 24 811 6 720
Penicillin-binding protein 1A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) OX=441771 GN=pbpA PE=3 SV=1
A7FY32 2.43e-109 24 811 6 720
Penicillin-binding protein 1A OS=Clostridium botulinum (strain ATCC 19397 / Type A) OX=441770 GN=pbpA PE=3 SV=1
A7GHV1 8.58e-109 24 811 6 720
Penicillin-binding protein 1A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) OX=441772 GN=pbpA PE=3 SV=1
Q0TNZ8 1.35e-106 11 802 12 733
Penicillin-binding protein 1A OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=pbpA PE=3 SV=1
Q0SRL7 2.13e-105 11 798 12 729
Penicillin-binding protein 1A OS=Clostridium perfringens (strain SM101 / Type A) OX=289380 GN=pbpA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.994290 0.004346 0.000069 0.000032 0.000016 0.001265

TMHMM  Annotations      download full data without filtering help

start end
31 53