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CAZyme Information: MGYG000004628_00598

You are here: Home > Sequence: MGYG000004628_00598

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Lawsonibacter;
CAZyme ID MGYG000004628_00598
CAZy Family GT51
CAZyme Description Monofunctional biosynthetic peptidoglycan transglycosylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
887 MGYG000004628_7|CGC3 97002.43 4.3658
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004628 2940804 MAG Germany Europe
Gene Location Start: 61754;  End: 64417  Strand: -

Full Sequence      Download help

MSEQNYSSRY  PSRDERQSRS  GQNGEAPRRR  RKKSKKKKGG  VLRVIGTLLL  IFLTTSAFLA60
CFAAVYIVNV  ILPQANMDLS  SFNVDENSVM  YYQDKSTGEY  KELRQVLSVT  DSQWVDYEDM120
PQYLKDAAVA  IEDRRFWTHN  GVDWGRTAKA  VISMFTGGDI  QGGSTITQQL  IKNLTDYNET180
TVKRKVTEIF  RALYVDANYE  KEDILELYLN  VIPLGSGCEG  VGAAAEKYFG  KSVSDLTLAE240
CASLVGITNN  PSKYGPYSTA  RVANSDGEMW  DAVQWNKYRQ  EVILGQMLEQ  GKISQAEYDE300
AVAQELVFVG  SDADNGQSAS  NIYSWYEEQV  ITDVMNDLKE  EFGYSSQYVS  QMLSNGGLRI360
YTCVDPEVQA  AAEAIYYDRS  NLNYTSSKSG  QQLQSAITII  DNTTGDIAGL  VGRIGEKTIN420
RGTNLATGAL  RQPGSSIKPL  TVYAPAMDMG  LLTPISVLAD  YPYQVLNGKA  WPVNVDGRYR480
GQVTVTEALQ  WSYNTVAVRT  VALVTPTKSF  EFATQRFHLT  LESGRMVNGE  MQSDVNLAPL540
AMGGLTDGVT  TRQMANAYAV  FPENGIYREA  RTYTKVEDSD  GNVILDNSRE  DELATKESTA600
YYMNTMLQNV  VQSGGGTEAQ  LSGMTVAGKT  GTTDSKYDRW  FVGYTPYYTA  AVWVGYEYNE660
RVPASNNPAA  QLWKKVMAPI  HEGLENKSFD  KPSGLVKVSY  CLDCGGIATS  ACQYDPRGSR720
VATGYVMQED  APCTSCTCHS  LEPGSNSLVQ  VCVDSPILDE  NGQPTGGYHL  AGPYCPQESI780
RSYAYLNLDR  ESVGGAWAED  SGYFYSAQAD  PGVCTVHTGE  AVVPPEEGET  TNPDDPSDPN840
NPTDPNNPTD  PNNPTDPNNP  SQGGDTEGGG  TQEGNGETTE  QPSNPTN887

Enzyme Prediction      help

No EC number prediction in MGYG000004628_00598.

CAZyme Signature Domains help

Created with Snap4488133177221266310354399443487532576620665709753798842108287GT51
Family Start End Evalue family coverage
GT51 108 287 3.5e-59 0.943502824858757

CDD Domains      download full data without filtering help

Created with Snap448813317722126631035439944348753257662066570975379884241692MrcB113683PBP_1a_fam42698MrcA118678PBP_1b114714PbpC
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0744 MrcB 3.32e-168 41 692 11 608
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
TIGR02074 PBP_1a_fam 8.51e-168 113 683 3 531
penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG5009 MrcA 1.03e-115 42 698 2 736
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis].
TIGR02071 PBP_1b 5.16e-82 118 678 153 680
penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG4953 PbpC 4.39e-74 114 714 60 594
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Created with Snap448813317722126631035439944348753257662066570975379884243834QIA31344.1|GT5143834ANU41033.1|GT5143837QBB65500.1|GT5120837ALP94484.1|GT5141818QNL43378.1|GT51
Hit ID E-Value Query Start Query End Hit Start Hit End
QIA31344.1 2.08e-271 43 834 32 821
ANU41033.1 1.06e-270 43 834 8 797
QBB65500.1 8.31e-238 43 837 3 795
ALP94484.1 1.65e-237 20 837 9 827
QNL43378.1 1.31e-208 41 818 26 777

PDB Hits      download full data without filtering help

Created with Snap44881331772212663103543994434875325766206657097537988421157137U4H_A1956613ZG8_B1956613ZG7_B1157352JE5_A1156573UDF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7U4H_A 1.45e-76 115 713 43 794
ChainA, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX],7U4H_B Chain B, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX]
3ZG8_B 7.90e-64 195 661 3 437
CrystalStructure of Penicillin Binding Protein 4 from Listeria monocytogenes in the Ampicillin bound form [Listeria monocytogenes],3ZG9_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form [Listeria monocytogenes],3ZGA_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Carbenicillin bound form [Listeria monocytogenes]
3ZG7_B 2.26e-57 195 661 3 437
CrystalStructure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the apo form [Listeria monocytogenes]
2JE5_A 3.09e-53 115 735 57 696
StructuralAnd Mechanistic Basis Of Penicillin Binding Protein Inhibition By Lactivicins [Streptococcus pneumoniae R6],2JE5_B Structural And Mechanistic Basis Of Penicillin Binding Protein Inhibition By Lactivicins [Streptococcus pneumoniae R6]
3UDF_A 4.81e-50 115 657 42 689
ChainA, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDF_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii]

Swiss-Prot Hits      download full data without filtering help

Created with Snap448813317722126631035439944348753257662066570975379884265740sp|Q0TNZ8|PBPA_CLOP166740sp|Q0SRL7|PBPA_CLOPS85732sp|A7GHV1|PBPA_CLOBL85732sp|A7FY32|PBPA_CLOB185732sp|A5I6G4|PBPA_CLOBH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0TNZ8 6.48e-107 65 740 48 725
Penicillin-binding protein 1A OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=pbpA PE=3 SV=1
Q0SRL7 1.00e-106 66 740 49 725
Penicillin-binding protein 1A OS=Clostridium perfringens (strain SM101 / Type A) OX=289380 GN=pbpA PE=3 SV=1
A7GHV1 9.45e-100 85 732 54 695
Penicillin-binding protein 1A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) OX=441772 GN=pbpA PE=3 SV=1
A7FY32 2.71e-99 85 732 54 695
Penicillin-binding protein 1A OS=Clostridium botulinum (strain ATCC 19397 / Type A) OX=441770 GN=pbpA PE=3 SV=1
A5I6G4 2.71e-99 85 732 54 695
Penicillin-binding protein 1A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) OX=441771 GN=pbpA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999628 0.000370 0.000001 0.000000 0.000000 0.000013

TMHMM  Annotations      download full data without filtering help

start end
39 72