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CAZyme Information: MGYG000004798_00402

You are here: Home > Sequence: MGYG000004798_00402

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterococcus_B hirae
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_B; Enterococcus_B hirae
CAZyme ID MGYG000004798_00402
CAZy Family GT51
CAZyme Description Penicillin-binding protein 1A/1B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
781 MGYG000004798_8|CGC2 86449.76 6.3204
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004798 2841576 Isolate United States North America
Gene Location Start: 209739;  End: 212084  Strand: -

Full Sequence      Download help

MPRKDTRKKQ  HRRKKQKWLG  LNIAFGVFQS  LTTFIVVLLL  LLAALGVGIG  AGYFAYLVED60
TEIPSKATLQ  SELGNITETS  KLVYADNSEI  SKIQTDLMRT  AVPSDQISPL  LKTAIISTED120
EYFERHNGYV  PKAVLRALFS  EATGIGSSGG  STLTQQLVKQ  QILTDETTFK  RKANEILLAA180
QVEKHFSKNE  IISMYLNVSP  FGRNNKGQNI  AGVQEAAKGI  FGVNAKDVNL  PQAAFIAGLP240
QSPITYSPYT  NTGSLKEDLS  AGLNRKDVVL  FSMYRENKIT  KQQYEEAKAY  DLTKDFLPQQ300
IAEQSDREFL  YYTVMGEATE  IITKQLAEKD  DADLSDSSVY  DAYYQKAQQT  IQNKGYTIHS360
TIDKNVYAAM  QEAAKSYGHL  LDDGKATQVE  TGNVLMDNKT  GRIYGFVGGR  NYLQNQNNHA420
FDTQRQAGSS  IKPVLVYGPA  IDMGLVGSES  RVSDYATTWQ  EGSNAGEKIV  NATNEGSNTF480
QTIRESLEWS  NNIPAYHLYQ  DVLENGGSKQ  YAYENYLAKM  NYPTNDNWGV  ESAPLGTVDV540
TTLEQTNGFQ  ALANGGVYQE  GYLIDSITDN  SGKVIYKHEE  KPVRVYSEAT  ASIMNDMMRS600
VITAKITTPF  KDDITALNHE  LGQADWIGKT  GSTNDYRDSW  LIVSTPSITI  SSWAGHDDNT660
GMDSRARLRS  SSYLANLINQ  VYQANPAMFG  TKDKFELSSD  VSKKKVASFT  GQLPGKVTVD720
KKTIETPSQT  VESLWAKNGP  KKSTFKFGVG  GTDENYKNYW  GTASSFARAH  PAKKENDKEK780
E781

Enzyme Prediction      help

No EC number prediction in MGYG000004798_00402.

CAZyme Signature Domains help

Created with Snap397811715619523427331235139042946850754658562466370274188273GT51
Family Start End Evalue family coverage
GT51 88 273 5.6e-52 0.9774011299435028

CDD Domains      download full data without filtering help

Created with Snap397811715619523427331235139042946850754658562466370274149733MrcB49662MrcA86274Transgly80662PbpC49658mrcA
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0744 MrcB 2.84e-151 49 733 24 646
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
COG5009 MrcA 2.99e-88 49 662 22 697
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis].
pfam00912 Transgly 4.75e-62 86 274 1 177
Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
COG4953 PbpC 1.18e-58 80 662 36 541
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis].
PRK11636 mrcA 9.84e-45 49 658 17 745
penicillin-binding protein 1a; Provisional

CAZyme Hits      help

Created with Snap39781171561952342733123513904294685075465856246637027411781ASV81833.1|GT511781AND72982.1|GT511781QKX67859.1|GT511781QKX70428.1|GT511781QQY23119.1|GT51
Hit ID E-Value Query Start Query End Hit Start Hit End
ASV81833.1 0.0 1 781 1 781
AND72982.1 0.0 1 781 1 781
QKX67859.1 0.0 1 781 1 781
QKX70428.1 0.0 1 781 1 781
QQY23119.1 0.0 1 781 1 781

PDB Hits      download full data without filtering help

Created with Snap3978117156195234273312351390429468507546585624663702741467622JE5_A2927622BG1_A2927622XD1_A2927622Y2G_A2927622UWX_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2JE5_A 2.74e-222 46 762 1 714
StructuralAnd Mechanistic Basis Of Penicillin Binding Protein Inhibition By Lactivicins [Streptococcus pneumoniae R6],2JE5_B Structural And Mechanistic Basis Of Penicillin Binding Protein Inhibition By Lactivicins [Streptococcus pneumoniae R6]
2BG1_A 1.20e-127 292 762 24 488
Activesite restructuring regulates ligand recognition in classA Penicillin-binding proteins (PBPs) [Streptococcus pneumoniae R6],2XD5_A Structural insights into the catalytic mechanism and the role of Streptococcus pneumoniae PBP1b [Streptococcus pneumoniae R6],2XD5_B Structural insights into the catalytic mechanism and the role of Streptococcus pneumoniae PBP1b [Streptococcus pneumoniae R6]
2XD1_A 1.20e-127 292 762 24 488
ACTIVESITE RESTRUCTURING REGULATES LIGAND RECOGNITION IN CLASS A PENICILLIN-BINDING PROTEINS [Streptococcus pneumoniae R6],2XD1_B ACTIVE SITE RESTRUCTURING REGULATES LIGAND RECOGNITION IN CLASS A PENICILLIN-BINDING PROTEINS [Streptococcus pneumoniae R6]
2Y2G_A 2.38e-127 292 762 24 488
Penicillin-BindingProtein 1b (Pbp-1b) In Complex With An Alkyl Boronate (A01) [Streptococcus pneumoniae R6],2Y2G_B Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (A01) [Streptococcus pneumoniae R6],2Y2H_A Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (Za2) [Streptococcus pneumoniae R6],2Y2H_B Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (Za2) [Streptococcus pneumoniae R6],2Y2I_A Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (Za3) [Streptococcus pneumoniae R6],2Y2J_A Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (Za4) [Streptococcus pneumoniae R6],2Y2K_A Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (Za5) [Streptococcus pneumoniae R6],2Y2L_A Penicillin-binding Protein 1b (pbp-1b) In Complex With An Alkyl Boronate (e06) [Streptococcus pneumoniae R6],2Y2L_B Penicillin-binding Protein 1b (pbp-1b) In Complex With An Alkyl Boronate (e06) [Streptococcus pneumoniae R6],2Y2M_A Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (E08) [Streptococcus pneumoniae R6],2Y2N_A Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (E07) [Streptococcus pneumoniae R6],2Y2O_A Penicillin-binding Protein 1b (pbp-1b) In Complex With An Alkyl Boronate (eo9) [Streptococcus pneumoniae R6],2Y2P_A Penicillin-binding protein 1b (pbp-1b) in complex with an alkyl boronate (z10) [Streptococcus pneumoniae R6],2Y2Q_A Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (Z06) [Streptococcus pneumoniae R6],2Y2Q_B Penicillin-Binding Protein 1b (Pbp-1b) In Complex With An Alkyl Boronate (Z06) [Streptococcus pneumoniae R6]
2UWX_A 6.66e-127 292 762 24 488
Activesite restructuring regulates ligand recognition in class A penicillin-binding proteins [Streptococcus pneumoniae R6]

Swiss-Prot Hits      download full data without filtering help

Created with Snap39781171561952342733123513904294685075465856246637027419658sp|Q891X1|PBPA_CLOTE45686sp|A0A0H2ZMF9|PBP2A_STRP245686sp|Q8DNB6|PBP2A_STRR682657sp|Q0SRL7|PBPA_CLOPS45659sp|P39793|PBPA_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q891X1 1.13e-51 9 658 5 630
Penicillin-binding protein 1A OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=pbpA PE=3 SV=1
A0A0H2ZMF9 2.05e-51 45 686 63 656
Penicillin-binding protein 2a OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) OX=373153 GN=pbp2a PE=1 SV=1
Q8DNB6 2.05e-51 45 686 63 656
Penicillin-binding protein 2a OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=pbp2a PE=1 SV=1
Q0SRL7 9.04e-51 82 657 73 641
Penicillin-binding protein 1A OS=Clostridium perfringens (strain SM101 / Type A) OX=289380 GN=pbpA PE=3 SV=1
P39793 9.42e-51 45 659 47 617
Penicillin-binding protein 1A/1B OS=Bacillus subtilis (strain 168) OX=224308 GN=ponA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999447 0.000563 0.000003 0.000002 0.000001 0.000006

TMHMM  Annotations      download full data without filtering help

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